BAC Information

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BAC

Clone NameB6Ng01-350L23
Chromosome4 (Build37)
Map Location 21,591,917 - 21,593,041
singlet/doubletsinglet
Overlap genenone
Upstream geneE130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik, LOC100040379, Fbxl4, Pou3f2, LOC664911
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350L23.bB6Ng01-350L23.g
ACCGA131332GA131333
length1,2011,111
definitionB6Ng01-350L23.b B6Ng01-350L23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcaattaatccctcaatatttaagtttgtcttagaattgagtc
ctgtggctaccatgatatctaacagatatgcccttagactgatcaaaatc
tttagagactgaaacccccattcaaacttggaggtttgcagaaaaatgaa
tggaactagagatcatgttaagtatcaaacaaaaaaaaaagacaaataaa
atgttattctcatttcatttctattactgcggtaaaatgccacagcaaca
agcaatctctgaggaagcaagtccgtcatattgggaagtcaaagaagcag
gaactcaagactataattatcatactataagaaatagcaaatataaatcc
tttgtttcaaatactataaaacttgtgtttaagatacacaattcacatct
ttttaccctatgcccttgaaaaactatattcaaatctttttaaaaactgt
tttcagatgtggtgtggctcagcccttagcacacatctttaatccctctg
agtagaatacagacatccccttagtaaaattggtttgtagacggaagcac
ccatgtttgaaagtgatggctagaaaagaggcaaacaaagagctgactca
gagaaagattctacagaatagaatatgcccaactcttatggaaatagaga
gaaaaagagaggctacttaagagagacccgtgaagatagagaaaagggaa
ggaggcatttttatgttttactgagagagtttcactgagacaggtttcag
agagagaacaaactagacatgggtgaagacagaaagagccagagaacgag
gaggagtcagaaagttagaacatattgccaaagtcagaatgaagcaaagc
tgagcaaaaagtcagagctgaggagagaaaagtcaaactgattcaattag
cttggagagaagtttgagccagaacagcacaaccagccagccagagttca
gaaagaactagaaaggggcgagcttacttagcagtcagtctcagaggctg
aaaaacgttctaggcctaggtaaggtttgtaaggaagtgtactggcctag
tttgtgttcaacatgacaacagctggtgtatccacagaagaagggagctc
agtttgggaacgcctccatggagatccaactgtaagccatttctcatagt
gattcaagggtacgctccatgtgggtggaccacatctctctctgggcctg
t
gaattccactctagctctacttcttaagaattgtggaaggtcacgggtaa
taaagaatccagtttgaaggtatgaacgtaatacttcactccaaaataat
gcaatttacattctgtttagcactttaattggttatattgttatctcttc
ataaaaaaacacacacacaacaaaactacatttatgaagaaaaagaaaaa
gatgctcacaaaaatggctcaggaggtaaagttagttcttgctgtttgac
acgtgtttgaatacctgtaacccacatgaaccttggtgctgaatagctgt
aatgcagtaatgcctcagagaggtaggagatgaacacaggatattctctg
tatgttctcaaataggactgtctcacacactcagtagtgaataggagacc
ctgtcccaaataaggtgacgagtgagagtcaacacctcaggttgtcctga
cctcatgcatacacacagtcacacacacacaattactgggctgaaaatgt
agctctccgtggttgaacctaacatgtttgagaacatgagttccattatc
taacagtccaatggagggaggggctactcttgaatttaagaattaattat
ctctaaaattggagcttaggtctcatcccccactccccagggtgaaatag
gaacttcttagccttactcatgttttcctgttccccaaatgaaacgttaa
tcggaatggtgctctagctgtaactacctatttatagaacaaggaaaatg
aaacataaagaaatgctatgagtagacctcagttaaataccaaattcaac
tgtaaaaagaacagtttatgataactgcaaaaacttcattatgagctggg
gattggaggctattaaggagtttctgtcagttcagccagatctaaagcag
caacaggtgaacggacacaaagctggaaccttcatactttaaacagaagt
aaccgaaacacactagtaggcatcaagggagagtctttttacttcactct
gcttgcagtatcaggggattcgtatgatatgatcgtttcttgtcgctgat
gttgccttcggtctgcctgtgctttgcttagtcttcctgagattacatgg
atagtctgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_21591917_21593041
seq2: B6Ng01-350L23.g_68_1178

seq1  GAATTCCACTCTAGCTCTACTTCTTAAGAATTGTGGAAGGTCACGGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTAGCTCTACTTCTTAAGAATTGTGGAAGGTCACGGGTAA  50

seq1  TAAAGAATCCAGTTTGAAGGTATGAACGTAATACTTCACTCCAAAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATCCAGTTTGAAGGTATGAACGTAATACTTCACTCCAAAATAAT  100

seq1  GCAATTTACATTCTGTTTAGCACTTTAATTGGTTATATTGTTATCTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTACATTCTGTTTAGCACTTTAATTGGTTATATTGTTATCTCTTC  150

seq1  ATAAAAAAACACACACACAACAAAACTACATTTATGAAGAAAAAGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAACACACACACAACAAAACTACATTTATGAAGAAAAAGAAAAA  200

seq1  GATGCTCACAAAAATGGCTCAGGAGGTAAAGTTAGTTCTTGCTGTTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCACAAAAATGGCTCAGGAGGTAAAGTTAGTTCTTGCTGTTTGAC  250

seq1  ACGTGTTTGAATACCTGTAACCCACATGAACCTTGGTGCTGAATAGCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTTTGAATACCTGTAACCCACATGAACCTTGGTGCTGAATAGCTGT  300

seq1  AATGCAGTAATGCCTCAGAGAGGTAGGAGATGAACACAGGATATTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGTAATGCCTCAGAGAGGTAGGAGATGAACACAGGATATTCTCTG  350

seq1  TATGTTCTCAAATAGGACTGTCTCACACACTCAGTAGTGAATAGGAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTCAAATAGGACTGTCTCACACACTCAGTAGTGAATAGGAGACC  400

seq1  CTGTCCCAAATAAGGTGACGAGTGAGAGTCAACACCTCAGGTTGTCCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAAATAAGGTGACGAGTGAGAGTCAACACCTCAGGTTGTCCTGA  450

seq1  CCTCATGCATACACACAGTCACACACACACAATTACTGGGCTGAAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGCATACACACAGTCACACACACACAATTACTGGGCTGAAAATGT  500

seq1  AGCTCTCCGTGGTTGAACCTAACATGTTTGAGAACATGAGTTCCATTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCGTGGTTGAACCTAACATGTTTGAGAACATGAGTTCCATTATC  550

seq1  TAACAGTCCAATGGAGGGAGGGGCTACTCTTGAATTTAAGAATTAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCCAATGGAGGGAGGGGCTACTCTTGAATTTAAGAATTAATTAT  600

seq1  CTCTAAAATTGGAGCTTAGGTCTCATCCCCCACTCCCCAGGGTGAAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAATTGGAGCTTAGGTCTCATCCCCCACTCCCCAGGGTGAAATAG  650

seq1  GAACTTCTTAGCCTTACTCATGTTTTCCTGTTCCCCAAATGAAACGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTTAGCCTTACTCATGTTTTCCTGTTCCCCAAATGAAACGTTAA  700

seq1  TCGGAATGGTGCTCTAGCTGTAACTACCTATTTATAGAACAAGGAAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAATGGTGCTCTAGCTGTAACTACCTATTTATAGAACAAGGAAAATG  750

seq1  AAACATAAAGAAATGCTATGAGTAGACCTCAGTTAAATACCAAATTCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAAAGAAATGCTATGAGTAGACCTCAGTTAAATACCAAATTCAAC  800

seq1  TGTAAAAAGAACAGTTTATGATAACTGCAAAAACTTCATTATGAGCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAAGAACAGTTTATGATAACTGCAAAAACTTCATTATGAGCTGGG  850

seq1  GATTGGAGGCTATTAAGGAGTTTCTGTCAGTTCAGCCAGATCTAAAGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGAGGCTATTAAGGAGTTTCTGTCAGTTCAGCCAGATCTAAAGCAG  900

seq1  CAACAGGTGAACGGACACAAAGCTGGAACCTTCAATAC-TTAAACAGAAG  949
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  CAACAGGTGAACGGACACAAAGCTGGAACCTTC-ATACTTTAAACAGAAG  949

seq1  TAACCGAAACAACACTAGTAAGGCATCAAGGGAGAAGTCTTTTTACCTTC  999
      |||||||||| |||||||| |||||||||||||| |||||||||| ||||
seq2  TAACCGAAAC-ACACTAGT-AGGCATCAAGGGAG-AGTCTTTTTA-CTTC  995

seq1  ACTCTGCTTTGCAGTATCAGGGGGAATTCGTATTGAAATATGATTCGTTT  1049
      ||||||| |||||||||||||||  ||||||||    |||||| ||||||
seq2  ACTCTGC-TTGCAGTATCAGGGG--ATTCGTAT---GATATGA-TCGTTT  1038

seq1  CTTTGTCGCTGATGGTTGGCTTTCGTCTG-CTGTGCTTTGCTTTTAG-CT  1097
      | ||||||||||| |||| |||  ||||| |||||||||||  |||| ||
seq2  C-TTGTCGCTGAT-GTTGCCTTCGGTCTGCCTGTGCTTTGC--TTAGTCT  1084

seq1  TCGTGAAGATTACA-GGATAGTCTTGACA  1125
      || || |||||||| |||||||| |||||
seq2  TCCTG-AGATTACATGGATAGTC-TGACA  1111