GCGGCCGCTATACGACTCCTATAGTCCGAGAATCCGCGGAATTCCTTCAT
TCTGTACAGGAAGTTTTTCCACTTTCTTTGACACCTCCTTATGAAAGACT
AACACATTTTGTCTTTTATTGTAGGGAACTCAGAATATTCATAGACAGGT
ATTAGATGAAACTGGGTGCTTTAAGGAATATTTAGTCCATCAAATAGGAT
TGAGGAATGAAAGTGGAGAGAACCATCACTTTTATTGCTTTCTGTGTTCT
GAACATGTTCTAAACAATACATAGACTATTTAAAACAAATTAAAATATTA
TTAAGAATAAGATGGTCTTTCTAGCTACATTTATACTTGAAAATATCAAA
GTATATAGTAGTTGTACTGGCTAGTTTTGTTGCAACTTGACACAGCTGGA
GTTATCACAGGGAAAGGAGCTTCAGTTGAGGAAATGCCTCCAGGAGATCC
AGCTGTAAGGCATTTTCTCAATTAGTGATCAAAGCGGAAAGGCCCCTTAT
GTGTGGGACCATCCCTGGGTTGAGAGTCTTGGATTCTATAAGAGAGCAGG
CTGAGTAAGCCAGGGGAAGTAAGCCAGTAAAGAACTTCCCTCCATAGCCT
CTGCATCAGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCTTGACTTCT
TTTCGTGATGAACACCAATGTGGGAATGTAAGCCTAAN

CGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTCAGCAGTGTCTCAGACTCTCTTAA
AACACAGGGGCTTCACCTTTGAAAGACTTGAGGCCCCAGGGAGTGGGGAG
ACCTGGTAGGGTGGGGTGTGGTGGGGTGGCCCTTCCCCCTCCCTTCTCTT
CTTTTTTTTCTCTTTTTTCTTCTTTTTTTTTTTTTTCCCTTTCTTCTTTT
TTTCTTTTTTTTTTTTTCCCTCTTCTTTTTTTCTTCTTTTTTTTTTTTTT
CTTTCTTTTTTTTCTTTTTTTCTTCTCCCTTCTTTTTTTTTTTTTTCCCC
TTCCCCCTTCCCCCCTTTCCCTTTCCTCTTTCTTTTCCTCCTTCTCTTTC
CCTCCCTTTCTTTTTTCTTTTTTTCCTTTTTCTTTTTCCTTTCCTCTTTT
TCTTTCTTTTTTTTTTATTTTCCTCCTTTTTCTTTTTTTCTCTTTTCTCT
TTTTTTTTCTTTCTCTTCATCTTTCTCTTCTCTTCCTTTTTTCTTTTTTT
TTTTCTCTTTTTCTTCCTTTTTCTTTTTCTTTTCTTCTTTTTTTTTTTTT
TTCTTTTTTTCTCTCTTTTTCTTTTTTCTCTCCTTCTCTCTTTCTTTCCT
CTCTTCTTTTTCTTTTCCTTTTTTTTTTTTTCTTTCTTCACTTCTTTCCT
TTCCTTTCCATTCTTCTCTCCTCTCCTTTTTTCCTCTTTTCTCCTCTCTC
TTTTTCTTCTTTCCTATTTCTCTT

Query= MSMg01no046_e22.b1 MSMg01no046_e22.b1 CHROMAT_FILE:
MSMg01no046_e22.b1 PHD_FILE: MSMg01no046_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:26 2005
         (539 letters)



>mm_chr4_77429492_77430430
          Length = 939

 Score =  787 bits (407), Expect = 0.0
 Identities = 413/415 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtttttccactttctttgacacctccttatgaaagactaacacattttgtcttttattg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 agtttttccactttctttgacacctccttatgaaagactaacacattttgtcttttattg 356

                                                                       
Query: 61  tagggaactcagaatattcatagacaggtattagatgaaactgggtgctttaaggaatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tagggaactcagaatattcatagacaggtattagatgaaactgggtgctttaaggaatat 296

                                                                       
Query: 121 ttagtccatcaaataggattgaggaatgaaagtggagagaaccatcacttttattgcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttagtccatcaaataggattgaggaatgaaagtggagagaaccatcacttttattgcttt 236

                                                                       
Query: 181 ctgtgttctgaacatgttctaaacaatacatagactatttaaaacaaattaaaatattat 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| 
Sbjct: 235 ctgtgttctgaacatgttctaagcaatacatagactatttaaaacaaattaaaatattac 176

                                                                       
Query: 241 taagaataagatggtctttctagctacatttatacttgaaaatatcaaagtatatagtag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 taagaataagatggtctttctagctacatttatacttgaaaatatcaaagtatatagtag 116

                                                                       
Query: 301 ttgtactggctagttttgttgcaacttgacacagctggagttatcacagggaaaggagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ttgtactggctagttttgttgcaacttgacacagctggagttatcacagggaaaggagct 56

                                                                  
Query: 361 tcagttgaggaaatgcctccaggagatccagctgtaaggcattttctcaattagt 415
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  tcagttgaggaaatgcctccaggagatccagctgtaaggcattttctcaattagt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space:   491441
Effective search space used:   491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)