CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTAAGGTACTCTAAATAATGAGTTGTCTTGTTTTATGTAATCCATCT
ACCTCCTATGTCATTTTATGCTTCAGTTACTTCGAATGCTTTAAATAAAA
GAAAAAGGGGGAGAAACAGTAGACTGGAAGGAAGGTAGATGCTTAAAGTG
GCAGTTCACATTAACATTTAATAGGTATATGCCTAACTGTGTCCTAATCA
AGGCTTAAATCTGACAGGTTTGACAAGTGAGTTGAACTGCTCTCTTTATA
CAAGAAGCCCACAATTTATGAAAGGTCTTTGTATCAGGTGCTTTTCTGTA
CAGCAGGGCTTCTCTTTAGATGACTAGAGGAATTAGCCTATGAAAAAATC
AGAACACAAAAGTAGCCTCATTTACCTTTGGGTATAAATGTCATTTGATA
GCCTTCCTGGAATTTCAGTACATCAGGATGTTCTGTCTTATCTAGTTGAA
TCTTTTAATAAAGTATCAGGGGAATGGGACATTAGAAATCATTTTTTCTT
TAAAAATGAAATAGATACTTGAGAGGACATTTCTTTATATAATTCTAGAA
ATGTTTCTGATGATGCACTTAAAGCACTTGGGTAAACCACAGAATTTAGC
AAATCTCACCCAATCCTACAGAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCTCACTAAAGCCATCTGGCCCTTGGGGCATTTTTATTTGGCTGG
AAGGTTTTTAATGACTTTTTCTACATCCTTAAGAGATATGAGCCTATTTA
GATAGCTTACCTGCTCTTGATTTAACTTTGATATATGTTATCAGTCTTGA
AAATCATCCATTTAATCTAGAGTTACCTTTGCTACAGGTTTATCTATCTT
GTTGATTTTCTCAAAGAACCAGCTTTTTGTTTTGTTCTATTTGGTTGATT
TCAGCCCTGACTTTGACTATTTCCTGCCATCTGTTCTCCTTGGGTGTGTT
TCCTTTTTTTTGCTCGAGGGCTTTCAGGTGTGCTGTTAAGTTGCTAATGT
AAGATTTCCCCAATTTCTTGAAGAGGGCACTTAGTGCAATGGATTTTCCT
CTTAGCACTGCTTTCATTGTGTCCCATAAATTTGAGTATGCTATGCCATC
ATTTTCATTGTATTCCAGGAAGTCTTTAACTTTTTTCTTTACTTCTTCCC
TGACCAAGTTATCATGTAGCATAGAGTTGATAACTTTCCTCGGGTACATT
TGTCCACCGCTGTCCCTCTTGTTATTGATGTCTAGCCCTACCCCTTACCC
CATGGCGACC

Query= MSMg01no046_h01.b1 MSMg01no046_h01.b1 CHROMAT_FILE:
MSMg01no046_h01.b1 PHD_FILE: MSMg01no046_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:36 2005
         (631 letters)



>mm_chr4_75710638_75711668
          Length = 1031

 Score = 1151 bits (595), Expect = 0.0
 Identities = 619/627 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctaaggtactctaaataatgagttgtcttgttttatgtaatccatctacctcct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcctaaggtactctaaataatgagttgtcttgttttatgtaatccatctacctcct 772

                                                                       
Query: 65  atgtcattttatgcttcagttacttcgaatgctttaaataaaagaaaaagggggagaaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 atgtcattttatgcttcagttacttcgaatgctttaaataaaagaaaaagggggagaaac 712

                                                                       
Query: 125 agtagactggaaggaaggtagatgcttaaagtggcagttcacattaacatttaataggta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 agtagactggaaggaaggtagatgcttaaagtggcagttcacattaacatttaataggta 652

                                                                       
Query: 185 tatgcctaactgtgtcctaatcaaggcttaaatctgacaggtttgacaagtgagttgaac 244
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 651 tatgcctaactgtgtcctaatcaaggcttaaatctgacagatttgacaagtgagttgaac 592

                                                                       
Query: 245 tgctctctttatacaagaagcccacaatttatgaaaggtctttgtatcaggtgcttttct 304
           |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||
Sbjct: 591 tgctctctttatacaagaagcccacagtttatgaaaggtctttgtatcaggcgctcttct 532

                                                                       
Query: 305 gtacagcagggcttctctttagatgactagaggaattagcctatgaaaaaatcagaacac 364
           ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 531 gtacagcagggcttctcttcagatgactagagaaattagcctatgaaaaaatcagaacac 472

                                                                       
Query: 365 aaaagtagcctcatttacctttgggtataaatgtcatttgatagccttcctggaatttca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaaagtagcctcatttacctttgggtataaatgtcatttgatagccttcctggaatttca 412

                                                                       
Query: 425 gtacatcaggatgttctgtcttatctagttgaatcttttaataaagtatcaggggaatgg 484
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 411 gtacatcaggatgttctgtcttatctagttgaatcttttagtaaagtatcaggggaatgg 352

                                                                       
Query: 485 gacattagaaatcattttttctttaaaaatgaaatagatacttgagaggacatttcttta 544
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 351 gacattagaaatcattttttctttaaaaatgaaatagatacttgagaggatatttcttta 292

                                                                       
Query: 545 tataattctagaaatgtttctgatgatgcacttaaagcacttgggtaaaccacagaattt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tataattctagaaatgtttctgatgatgcacttaaagcacttgggtaaaccacagaattt 232

                                      
Query: 605 agcaaatctcacccaatcctacagaat 631
           |||||||||||||||||||||||||||
Sbjct: 231 agcaaatctcacccaatcctacagaat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)