CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCACTTCTGAGCCCCATTTTTAATGGGGTTATTTGATATTCTG
AAGTCCACTTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATC
TGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTG
TCTTATTGACGGTGTCTTTTGCTTTGCAGAAACTTTGGAGTTTCATTAGG
TCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTT
CAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTCTTCCCCACTTTCT
CCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCAC
TTAGATTTTACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCT
TCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGT
CTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCA
TAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTGC
TTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGT
AGTAAAGCTTTAGGTCTG

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAAGTCCTGTGACTAGTTATTTGGCTA
GTTAGTTGTTGATTGTTATTCTTGGTATTGGGTGTTGAAACTAAATAGCA
AACCGATATATTTACCCTTTTGTGTTATTGTTCTGCAAATCTTCCTTGCA
ACAGATCTTCCTTGAGAAGTTCCATAATTATTATTCTTGTCATCTAAAGA
TGTAGTATATTATAATTTTTCATCCAGTTGTTCCTTTGTTAATATAGCTC
GGTAACCCTTCAAAGGTTCATCTTTGATGTGCATCTAAGATTTAGATGTA
TAGACTTAATATCAGATGTCAAAGAAAAAATGGGAATGTCCAGTTGCTGC
TAAGGCAAAATCTCTCTGAAGAGACACAACTCACAGAAGTTAGGAGAAAT
GCTAACCAAAACATCTTTAAAGGTGCATATCTGTAACTTTGCAGAATCAA
TACGTATTTGAGAAGAGATAGAAAAGTTTGCAATTTTGTGACATGATTGA
AAATGGATGCTGCCACAACACATTTCTGTGGTCTAGAAAGTTTCCAAGAC
ATTAAATGTTTTCTGTTCAGTATAGAGATCACGATGGTTGAGGAAAAAGA
AATAAAAAACAATTATAACCA

Query= MSMg01no046_l16.g1 MSMg01no046_l16.g1 CHROMAT_FILE:
MSMg01no046_l16.g1 PHD_FILE: MSMg01no046_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:57 2005
         (584 letters)



>mm_chr4_80164922_80165902
          Length = 981

 Score = 1052 bits (544), Expect = 0.0
 Identities = 573/584 (98%), Gaps = 3/584 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagtcctgtgactagttatttggctagttagttgttgattgttattcttggtattgggt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 781 aaagtcctgtgactagttatttggctagttagttgttgattgttattcttggtattggat 722

                                                                       
Query: 61  gttgaaactaaatagcaaaccgatatatttacccttttgtgttattgttctgcaaatctt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 721 gttgaaactaaatagcaaaccgatatatttacccttctgtgttattgttctgcaaatct- 663

                                                                       
Query: 121 ccttgcaacagatcttccttgagaagttccataattattattcttgtcatctaaagatgt 180
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 662 --ttgcaacagatcttccttgacaagttccataattattattcttgtcatctaaagatgt 605

                                                                       
Query: 181 agtatattataatttttcatccagttgttcctttgttaatatagctcggtaacccttcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agtatattataatttttcatccagttgttcctttgttaatatagctcggtaacccttcaa 545

                                                                       
Query: 241 aggttcatctttgatgtgcatctaagatttagatgtatagacttaatatcagatgtcaaa 300
           ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 544 aggatcatctttaatgtgcatctaagatttagatgtctagacttaatatcagatgtcaaa 485

                                                                       
Query: 301 gaaaaaatgggaatgtccagttgctgctaaggcaaaatctctctgaagagacacaactca 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 484 gaaaaaatgggaatgtccagttgctgctaaggcaaaagctctctgaagagacacaactca 425

                                                                       
Query: 361 cagaagttaggagaaatgctaaccaaaacatctttaaaggtgcatatctgtaactttgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cagaagttaggagaaatgctaaccaaaacatctttaaaggtgcatatctgtaactttgca 365

                                                                       
Query: 421 gaatcaatacgtatttgagaagagatagaaaagtttgcaattttgtgacatgattgaaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaatcaatacgtatttgagaagagatagaaaagtttgcaattttgtgacatgattgaaaa 305

                                                                       
Query: 481 tggatgctgccacaacacatttctgtggtctagaaagtttccaagacattaaatgttttc 540
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 304 tggatgctgccacaacacatttctgtggtctagaaactttccaagacattaaatgttttc 245

                                                       
Query: 541 tgttcagtatagagatcacgatggttgaggaaaaagaaataaaa 584
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgttcagtatagagatcacgatggttgaggaaaaagaaataaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 981
Length adjustment: 10
Effective length of query: 574
Effective length of database: 971
Effective search space:   557354
Effective search space used:   557354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)