CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTAGGAAGTCTCTCGATTTATTTCTTTATTTCTGATTTGACCTGGT
AGTCATTCAGTAGAGAGTTGTTCAGTTTCTCTGAATTTGTAGGCTTTCTG
TTGTTGATCTATTGAGATCCAGCTTTAATTCATGGTGATCTGATAGGATA
TAGGATTCAACTTTATTGTCTTTTGCAACTTGCTTTCTGACTGAATATGT
GGTCAATTTTTGAGCATGTTGCATGAGGTGCTGAGAAGAAGGTATTATCT
TTTATGTCGTGAAATAGTCTGTAGATATTTATTAGGTCTATTTGAGTCCT
AATATGTGTTAACTCTGTTACTTCTAACTTTCTTTTTTGTCTACATGATT
TGTCCATTGATGAGAATGATGTTTTGAAGGTTCTCACTATTATTATATGG
GGTTCAATATGTGATTGAGATTTTAGTAATGTTTGTTTACAAATGTGGAT
GTTCTTACATTTAGGGCTTAGATGTTGAGGATTGAGACACCATCTTGGCT
GACATTTCCTCTGATGAATATGAATCTCTTTCAATTAATTTTGTTTGGAA
TTATATTTGGTTAGAAATTAAAATTGCTATACCAGCTTGTTTCTTGGGTC
CATTTGCTTGGAAAATCTTTCTCCAAGCCTTTACTCTAAGCTA

ACAATGAAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTACCTTTGTTGACTTTGTGTTTCTC
AACAATTTTCACACAAGATGTAGCTATGTCTGCTACTTATTGACACCTGA
TTATCTAAAAATACAACGTGCCTTCAAATTCCTACATCACTAAAGAATCA
TATTTTAAAGTCAGAGTTTTCTTACTTGTCACTCTTCACATTTTTGGTAC
AAAGTGTTAGGTTCAACTTTTAATGAAACACCCTGTGGGAAAAATGCAAC
GTTTCTATTCAGTTTTAAAAATTGAAAGGTGGTACTATATTCATCATCAA
AGAGGAGTGATGTGTCTTAATGCTACATGGTCCCTGATGCTTTGTGTTGG
ACAAACTAACTAGAACCATAGGAGGACTTAGTTAGGATCTACTCTGCCTG
CCTGGGAGTGCCAGCATGCGAGCCAAAGACTTTGCTATAATTAGGGTGAT
TTGTTAATTTTTTATGCAATAGGGAAAACAGCCCTTAAAATATCAGTGTG
GGATTCTACAGCCAAATATGTGTAGACATGTGAGACCTTCCACAATGAAA
GAAGTGATTGAAAATGATTCACTTTTACATCCTCCACCTGCTACCTGATT
CTTCTTGATATTGATTTGTGAGAGAAAGAACTTTTTCCAAGTGT

Query= MSMg01no052_i02.g1 MSMg01no052_i02.g1 CHROMAT_FILE:
MSMg01no052_i02.g1 PHD_FILE: MSMg01no052_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:08 2005
         (615 letters)



>mm_chr4_90692384_90693398
          Length = 1015

 Score = 1181 bits (611), Expect = 0.0
 Identities = 614/615 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttacctttgttgactttgtgtttctcaacaattttcacacaagatgtagctatgtctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ttacctttgttgactttgtgtttctcaacaattttcacacaagatgtagctatgtctgct 756

                                                                       
Query: 61  acttattgacacctgattatctaaaaatacaacgtgccttcaaattcctacatcactaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 acttattgacacctgattatctaaaaatacaacgtgccttcaaattcctacatcactaaa 696

                                                                       
Query: 121 gaatcatattttaaagtcagagttttcttacttgtcactcttcacatttttggtacaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaatcatattttaaagtcagagttttcttacttgtcactcttcacatttttggtacaaag 636

                                                                       
Query: 181 tgttaggttcaacttttaatgaaacaccctgtgggaaaaatgcaacgtttctattcagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tgttaggttcaacttttaatgaaacaccctgtgggaaaaatgcaacgtttctattcagtt 576

                                                                       
Query: 241 ttaaaaattgaaaggtggtactatattcatcatcaaagaggagtgatgtgtcttaatgct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttaaaaattgaaaggtggtactatattcatcatcaaagaggagtgatgtgtcttaatgct 516

                                                                       
Query: 301 acatggtccctgatgctttgtgttggacaaactaactagaaccataggaggacttagtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acatggtccctgatgctttgtgttggacaaactaactagaaccataggaggacttagtta 456

                                                                       
Query: 361 ggatctactctgcctgcctgggagtgccagcatgcgagccaaagactttgctataattag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggatctactctgcctgcctgggagtgccagcatgcgagccaaagactttgctataattag 396

                                                                       
Query: 421 ggtgatttgttaattttttatgcaatagggaaaacagcccttaaaatatcagtgtgggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggtgatttgttaattttttatgcaatagggaaaacagcccttaaaatatcagtgtgggat 336

                                                                       
Query: 481 tctacagccaaatatgtgtagacatgtgagaccttccacaatgaaagaagtgattgaaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tctacagccaaatatgtgtagacatgtgagaccttccacaatgaaagaagtgattgaaaa 276

                                                                       
Query: 541 tgattcacttttacatcctccacctgctacctgattcttcttgatattgatttgtgagag 600
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 275 tgattcacttttacatcctccacctgctgcctgattcttcttgatattgatttgtgagag 216

                          
Query: 601 aaagaactttttcca 615
           |||||||||||||||
Sbjct: 215 aaagaactttttcca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)