Query= MSMg01no053_f07.b1 MSMg01no053_f07.b1 CHROMAT_FILE:
MSMg01no053_f07.b1 PHD_FILE: MSMg01no053_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:13 2005
(561 letters)
>mm_chr8_44336015_44336975
Length = 961
Score = 1064 bits (550), Expect = 0.0
Identities = 559/562 (99%), Gaps = 1/562 (0%)
Strand = Plus / Plus
Query: 1 agtttcaatcttccagtcctatacggagcataagaactgagtcatatgtacttatgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttcaatcttccagtcctatacggagcataagaactgagtcatatgtacttatgttct 260
Query: 61 aataacataatttaaatataagtcagtctaaagagaacttgcaggctggagagatggctc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 aataacataatttaaatataagtcagtcgaaagagaacttgcaggctggagagatggctc 320
Query: 121 agtggttaagagcagtgactgctcttctagaggtcctgagttcaattcccagcaaccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtggttaagagcagtgactgctcttctagaggtcctgagttcaattcccagcaaccaca 380
Query: 181 tggtggctcacaaccatctgtagtgggtgataccctcttctgttgtatctgaagacagcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtggctcacaaccatctgtagtgggtgataccctcttctgttgtatctgaagacagcg 440
Query: 241 actgaatatccatatacatcaaacaaacaaacaaacaaacaaacaaacaaatctttaaaa 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgaatatccacatacatcaaacaaacaaacaaacaaacaaacaaacaaatctttaaaa 500
Query: 301 aacaattataaaaagaaagagtacttgcttgatatgaaaaaaaaaa-gccctgggtttaa 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 aacaattataaaaagaaagagtacttgcttgatatgaaaaaaaaaaagccctgggtttaa 560
Query: 360 agccagttatgcgggtccatgcctataatcctagcacttagcactagtagaagttcaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccagttatgcgggtccatgcctataatcctagcacttagcactagtagaagttcaggg 620
Query: 420 tcatcctcagctacattgtgagtttaaggccaggctgggctacaggagaccttatcaata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatcctcagctacattgtgagtttaaggccaggctgggctacaggagaccttatcaata 680
Query: 480 gtagtagcagcagtagtggtagtaatgatagtacagccccttagctgggtgatgccggca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtagtagcagcagtagtggtagtaatgatagtacagccccttagctgggtgatgccggca 740
Query: 540 catgcctttcattctagcaccc 561
||||||||||||||||||||||
Sbjct: 741 catgcctttcattctagcaccc 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_f07.g1 MSMg01no053_f07.g1 CHROMAT_FILE:
MSMg01no053_f07.g1 PHD_FILE: MSMg01no053_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:13 2005
(616 letters)
>mm_chr4_76851080_76852095
Length = 1016
Score = 1145 bits (592), Expect = 0.0
Identities = 610/616 (99%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 1 actaggaggaaaagcaatattntgggaagtaaataaataaaataattaactaataaaaaa 60
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actaggagggaaagcaatatt-tgggaagtaaataaataaaataattaactaataaaaaa 260
Query: 61 caaaaaggggaataaatgtcaggcatggcaaaatataatgaatgtagttgagcaatccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaaggggaataaatgtcaggcatggcaaaatataatgaatgtagttgagcaatccaa 320
Query: 121 tttaactgaaaaattgatattacatgatctaataaattgaatttttatttgtttaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaactgaaaaattgatattacatgatctaataaattgaatttttatttgtttaaaaaa 380
Query: 181 tggggaagctcagtggattatctttgattgcttgtttttaaataataagtaaataagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggggaagctcagtggattatctttgattgcttgtttttaaataataagtaaataagtac 440
Query: 241 attgtctacttattttataaatattatttaatatttaataattctaataatagatattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtctacttattttataaatattatttaatatttaataattctaataatagatattaa 500
Query: 301 atattatagtgagatgatcaatacataaatatttttgaatgggaccctcactacataaat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atattatagtgagatggtcaatacataaatatttttgaatgggaccctcactacataaat 560
Query: 361 catttctgatgttactctcatttgtctaaaactagacaaatgtagaaggcatgatggatt 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 catttctgatgttactctcatttgtctaaaactagacaaatgtagaaagcatgatggatt 620
Query: 421 gtcacttttttcatatgacatggtgagaaaataccagaaataatgtagactaagaagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcacttttttcatatgacatggtgagaaaataccagaaataatgtagactaagaagtga 680
Query: 481 gtaaatgttaatgacagggtagagaggtggctcacgtgttccagtacttatgaatttata 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 gtaaatgttaatgacagggtagagaggtggctcacttgttccagtacttatgaatttata 740
Query: 541 tagaatcccacacactgggtgtctcattcacctgatccctagatgaaatggatctcacat 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagaagcccacacactgggtgtctcattcacctgatccctagatgaaatggatctcacat 800
Query: 601 attatttctagtttcc 616
||||||||||||||||
Sbjct: 801 attatttctagtttcc 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
