Query= MSMg01no055_a19.b1 MSMg01no055_a19.b1 CHROMAT_FILE:
MSMg01no055_a19.b1 PHD_FILE: MSMg01no055_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:22 2005
(276 letters)
>mm_chr4_6699797_6700472
Length = 676
Score = 534 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Minus
Query: 1 gactaatgatttattactgctgtaatgaacttcacaggcatcaatacattaggatccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gactaatgatttattactgctgtaatgaacttcacaggcatcaatacattaggatccact 417
Query: 61 ttgaaaagaaacttgtcaggtcccattgcaatggtgatcagtttactattgttactaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttgaaaagaaacttgtcaggtcccattgcaatggtgatcagtttactattgttactaatg 357
Query: 121 accctgatcagctctttggatctatgaataacctttctagatgacagaggtcatccattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 accctgatcagctctttggatctatgaataacctttctagatgacagaggtcatccattg 297
Query: 181 gggaggatcaatgtttatgcaaactaaaagtatatgctgttccccctccctttttccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gggaggatcaatgtttatgcaaactaaaagtatatgctgttccccctccctttttccaca 237
Query: 241 caggaaattgtagtcagctttcaaagctttaagctt 276
||||||||||||||||||||||||||||||||||||
Sbjct: 236 caggaaattgtagtcagctttcaaagctttaagctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no055_a19.g1 MSMg01no055_a19.g1 CHROMAT_FILE:
MSMg01no055_a19.g1 PHD_FILE: MSMg01no055_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:22 2005
(557 letters)
>mm_chr4_6632723_6633679
Length = 957
Score = 992 bits (513), Expect = 0.0
Identities = 546/557 (98%)
Strand = Plus / Plus
Query: 1 tcttcagagtcaggaggacaccattttagatagcctcacacaactcttttgccttttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttcagagtcaggaggacaccattttagatagcctcacacaactcttttgccttttgat 260
Query: 61 tgtgaattcagtttttggagctcgctaatactgagtcgaagccaaagctgtgggttctat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgaattcagtttttggagctcactaatactgagtcgaagccaaagctgtgggttctat 320
Query: 121 cttggtgatgtctggagaaaagagtgatgtgtgaaaatagtgtaacaagattgattttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggtgatgtctggagaaaagagtgatgtgtgaaaatagtgtaacaagattgattttct 380
Query: 181 agtgtggctcataaacttttcctgactccagttctaaatgggagtttcagaaaaatctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtggctcataaacttttcctgactccagttctaaatgggagtttcagaaaaatctct 440
Query: 241 caaaccctgttagcaataaaaaaatgagtttctggcctcccaaggtgacttttttgaatg 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaccctgggagcaataaaaaaatgagtttctggcctcccaaggtgacttttttgaatg 500
Query: 301 caacactcatttggggaatataaatcctggtctatgtggtgaaatgaaaccacttccatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caacactcatttggggaatataaatcctggtctatgtggtgaaatgaaaccacttccatt 560
Query: 361 gctttaaagttttgtctattgctttcaacataatgatttagactcatgtctaggaatttc 420
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctttaaagttttctctattgccttcaacataatgatttagactcatgtctaggaatttc 620
Query: 421 ttagtctatggaaaaactatatttccttaagatgtatttaatagcccaagtcaatatgac 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 ttagtctatggaaaaactatatttccttaagatgtatttaataacccaagtcaatatgac 680
Query: 481 cttgcatagtgaacaaccaagccagaacaactacactctcttcgtggtcttcacaggatt 540
|| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||
Sbjct: 681 ctcccatagtgaacaaccaagccagaacaactacgctcgcttcgtggtcctcacaggatt 740
Query: 541 tagggagcctaattcag 557
|||||||||||||||||
Sbjct: 741 tagggagcctaattcag 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
