AATXXXXXXXXXXXXXXXXXXXXXXXXXXATACCAAAGAGGATCCGCGGA
ATTCCAGATTTCTCATTCATGTGCTTAAAACAGCTGCTTGGCCTTGAACT
GTCACTGTGCTCTGGGTCCCTCTTACTGTGTCTTTGCTCTGGGACCCTCT
TGCTGTGCCCCTCTGTGCTGGGCTGTGTTTCTAGAAGTGCCAGCATCTAG
ATAATCACAGGTCAGCCTGTGCAATGTGACCTGTGCCAGACAGCAATGAA
TTCGTGAGAAGTAATAGGTAATTTGACCTAATTTGGCTTGAGCCTCTCCT
GGGCTGAGATGATATTACCGACTGAATACAATTATACATGATCATTTGGT
GCTTTTGTATCTACAGGCAGCTAGGGACTCAAGTTGGATCATCTCACCTA
TGAAATTTCCCCAAGGGTTTCTAGATAATGACTTTAAATGCTAATTACAA
CATGTAGTCAATGCTCTGATAAAATTGAGAGCATTTTGATTTATGATGGA
TATTAAGTAAGAGCAGGAATAAAACCCAGTGTATTTAAAGGGTTTAAATG
CACTCTGAAGGTTTGAACATGAAAAGAAAACTGCAGAGCACTTTTTTTTT
CTTTAGCAATTATGTTGTTTTAGCTAGAAAATATGTTCCCCTTATTACTG
TCAATGTTGCTACTGTAGGAATTGACCTAGTTATGTCCAAATTGACAATC

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCA
TGAATGTGTGTTGGATCTTGTCAAATGCTTTTTCTGCAACTAATGAGATG
ATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGAT
GACTTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTT
GGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCAGTTAGCGAGA
ATTTTATTGAGGATTTTTGCATCGATATTCAGAAGAGAAATTGGTCTGAA
GTTCTCTATCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAATAATAG
TGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTTGAA
ATAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAAC
TCTGCACAAAACCTGTCTGGTCCTGGGCTTTTTTTGGCTGGGACACTATT
AATAACTGCTTCTATTTCTTTATGGGATATGTGACTGTCTAGATGGTCAA
CTTGATCCTGAACCAACTTTGGTACCTGGTATCTGTCCAGATATTTGTCC
ATTTCGTCCAGGTCTTCCAATTTTTGTTGAGTATAGCCTTTTGTANAAGG
ATCTGATGGTGTTTTGCACTTCTTCTTGATCTGT

Query= MSMg01no055_f15.b1 MSMg01no055_f15.b1 CHROMAT_FILE:
MSMg01no055_f15.b1 PHD_FILE: MSMg01no055_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:44 2005
         (578 letters)



>mm_chr4_14139208_14140183
          Length = 976

 Score = 1064 bits (550), Expect = 0.0
 Identities = 571/578 (98%), Gaps = 2/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgcttaaaacagctgcttggccttgaactgtcactgtgctctgggtccctcttactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgcttaaaacagctgcttggccttgaactgtcactgtgctctgggtccctcttactgt 260

                                                                       
Query: 61  gtctttgctctgggaccctcttgctgtgcccctctgtgctgggctgtgtttctagaagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctttgctctgggaccctcttgctgtgcccctctgtgctgggctgtgtttctagaagtg 320

                                                                       
Query: 121 ccagcatctagataatcacaggtcagcctgtgcaatgtgacctgtgccagacagcaatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagcatctagataatcacaggtcagcctgtgcaatgtgacctgtgccagacagcaatga 380

                                                                       
Query: 181 attcgtgagaagtaataggtaatttgacctaatttggcttgagcctctcctgggctgaga 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcctgagaagtaataggtaatttgacctaatttggcttgagcctctcctgggctgaga 440

                                                                       
Query: 241 tgatattaccgactgaatacaattatacatgatcatttggtgcttttgtatctacaggca 300
           ||| |||||| ||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 441 tgagattaccaactgaatacaattatacatgatcatttggtgcttttg-acctacaggca 499

                                                                       
Query: 301 gctagggactcaagttggatcatctcacctatgaaatttccccaagggtttctagataat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctagggactcaagttggatcatctcacctatgaaatttccccaagggtttctagataat 559

                                                                       
Query: 361 gactttaaatgctaattacaacatgtagtcaatgctctgataaaattgagagcattttga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gactttaaatgctaattacaacatgtagtcaatgctctgataaaattgagagcattttga 619

                                                                       
Query: 421 tttatgatggatattaagtaagagcaggaataaaacccagtgtatttaaagggtttaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttatgatggatattaagtaagagcaggaataaaacccagtgtatttaaagggtttaaat 679

                                                                       
Query: 481 gcactctgaaggtttgaacatgaaaagaaaactgcagagcactttttttttctttagcaa 540
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 680 gcactctgaaggtttgaacatgaaaagaaaactgcagagcactttttttt-ctttagtaa 738

                                                 
Query: 541 ttatgttgttttagctagaaaatatgttccccttatta 578
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttatgttgttttagctagaaaatatgttccccttatta 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 976
Length adjustment: 10
Effective length of query: 568
Effective length of database: 966
Effective search space:   548688
Effective search space used:   548688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)