TACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTAATTTTCTGAAGAAAATATCGATGATAACCTGATATTTTCAT
CTTATTTCAGAACCTAACATGCTGTCTAATTTCAGTGTAACAAACCACAC
ATAACACCAAGATAGTATAGACCATGAAAATCAAAGAGATATCTAAAAAG
ATTAGTAAGATTTTTTTTATTCTCTTTAATGCCTGTTATCAGAAAAGTAT
ATATAGCTGTATAGAATCAAATTTAATCCAATATTTGGTAAATCTACAGG
CTCAATATGAAAACCACTTTTATTTCTTTCATAAGAATTCCCACTAAGTT
TTCTAGCCTTCCCCGTGCGACAATTTTTCTAGGAAAAAAAAAATTCCAAG
AGCTTTGATGAGACTTTCTTAGTATCAGTAGCAGGCAGAATTCTATTTTC
AAAATACAACCACAGCATTTTCTCCAGATAGACCAGACTCTCTTATTGGT
AGCTCTAAAATCACAGAAAAAGATGTGATTCTGGGTCTTTGAGTATTTTT
GTAATTTCCTTTAGTATTTAGAAGAAAGCACGTGCAAAGAACGAAGTCCA
TCTGAATGGCAGCTGTCCCCGTAAGTTTGGAATGTCTAGGCTCTTTTATA
AGGTAGGTATCCTAACTCTAANATTGACCATCAAGAA

NCCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTAGGTTGAGGAATAAGTAAGAAAG
GATCATTGTAATAAAGTGTGGGGTTAATATCATGTCTGATTAGCATTTTG
CATTAATATCAACATTTAAATATTCCACTGGCTTCTGCTAGTTCCTAATA
AAGAATGCTTCTCCATTTTATGTATTTAGAAATCCCTCCCCATGAATTTA
AGAGTCATATTCTATTTTTTAATGTTTATTTTATTTATCGATTTTATGGA
TGAGTAGCCTGCTGCATGTACTCCTGCATAACAGAAGAGGGCATCATATG
GCCATTAGCCACCATGTGGCTGCTGGGAATTGTTCTCGGGACCTCTGGAA
AAGCAGCCAGTGCCCCTAACTGCTGAACCATCTCCCCAGTCCCACATTCT
AGAATTACTAAAATTTACTTATACCTCAGCAAATAAGAATCATAGCAAGC
TGAAAAGGGTGGCGCTTCCCTGTAATACCAGCACTTGGATCCTGAAGACT
GCAAATTCCAGGCCTGCCTGGTCTACATATTCAGACTCTGTATTGAAGCA
TATACACAAGCAAGGCCATTAAGGCACTTCATCCCTATTTACCCTGCAAC
TTATATATATGCTCGCATGCTGTCTTTTGACTTA

Query= MSMg01no057_i13.b1 MSMg01no057_i13.b1 CHROMAT_FILE:
MSMg01no057_i13.b1 PHD_FILE: MSMg01no057_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:30 2005
         (571 letters)



>mm_chr4_75910524_75911494
          Length = 971

 Score =  992 bits (513), Expect = 0.0
 Identities = 555/569 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatatcgatgataacctgatattttcatcttatttcagaacctaacatgctgtctaatt 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aaatatcgatgataacctgatattttaatcttatttcagaacctaacatgctgtctaatt 260

                                                                       
Query: 61  tcagtgtaacaaaccacacataacaccaagatagtatagaccatgaaaatcaaagagata 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 tcagtgtaacaaaccacacataacaccaagataatatagaccatgaaaatcaaagagata 320

                                                                       
Query: 121 tctaaaaagattagtaagattttttttattctctttaatgcctgttatcagaaaagtata 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaaaagattggtaagattttttttattctctttaatgcctgttatcagaaaagtata 380

                                                                       
Query: 181 tatagctgtatagaatcaaatttaatccaatatttggtaaatctacaggctcaatatgaa 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagatgtatagaatcaaatttaatccaatatttggtaaatctacaggctcaatatgaa 440

                                                                       
Query: 241 aaccacttttatttctttcataagaattcccactaagttttctagccttccccgtgcgac 300
           |||||||   |||||||||||| ||||||||||||||||||||||||||||| ||| || 
Sbjct: 441 aaccactgcaatttctttcatacgaattcccactaagttttctagccttccctgtgtgaa 500

                                                                       
Query: 301 aatttttctaggaaaaaaaaaattccaagagctttgatgagactttcttagtatcagtag 360
           |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 501 aatttttctaggaaaaaaaaaagtccaagagctttgatgagtctttcttagtatcagtag 560

                                                                       
Query: 361 caggcagaattctattttcaaaatacaaccacagcattttctccagatagaccagactct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggcagaattctattttcaaaatacaaccacagcattttctccagatagaccagactct 620

                                                                       
Query: 421 cttattggtagctctaaaatcacagaaaaagatgtgattctgggtctttgagtatttttg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttattggtagctctaaaatcacagaaaaagatgtgattctgggtctttgagtatttttg 680

                                                                       
Query: 481 taatttcctttagtatttagaagaaagcacgtgcaaagaacgaagtccatctgaatggca 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 taatttcctttagtatttagaagaaagcacgtgcaaagaacgaagtccatctgaatggaa 740

                                        
Query: 541 gctgtccccgtaagtttggaatgtctagg 569
           |||||||||||||||||||||||||||||
Sbjct: 741 gctgtccccgtaagtttggaatgtctagg 769


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no057_i13.g1 MSMg01no057_i13.g1 CHROMAT_FILE:
MSMg01no057_i13.g1 PHD_FILE: MSMg01no057_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:31 2005
         (333 letters)



>mm_chr4_76028719_76029451
          Length = 733

 Score =  601 bits (311), Expect = e-176
 Identities = 326/331 (98%)
 Strand = Plus / Minus

                                                                       
Query: 3   aggttgaggaataagtaagaaaggatcattgtaataaagtgtggggttaatatcatgtct 62
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggttgaggaataattaagaatggatcattgtaataaagtgtggggttaatatcatgtct 325

                                                                       
Query: 63  gattagcattttgcattaatatcaacatttaaatattccactggcttctgctagttccta 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gattagcattttgcattaatatcaacatttaaatattccactggcttctgctagttccta 265

                                                                       
Query: 123 ataaagaatgcttctccattttatgtatttagaaatccctccccatgaatttaagagtca 182
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 ataaagaatgcttctccattttatgtatttagaaatccctccccaggaatttaagagtca 205

                                                                       
Query: 183 tattctattttttaatgtttattttatttatcgattttatggatgagtagcctgctgcat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tattctattttttaatgtttattttatttatcgattttatggatgagtagcctgctgcat 145

                                                                       
Query: 243 gtactcctgcataacagaagagggcatcatatggccattagccaccatgtggctgctggg 302
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 144 gtacacctgcataacagaagagggcatcatatggccattagccaccatgtgggtgctggg 85

                                          
Query: 303 aattgttctcgggacctctggaaaagcagcc 333
           |||||||||||||||||||||||||||||||
Sbjct: 84  aattgttctcgggacctctggaaaagcagcc 54


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space:   234576
Effective search space used:   234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)