CAAAATTTGCGGCGCTATACGACTCCTATATTCAGAAATCGCGCGGAATT
CTCACCTGATTACACTGAATGGCTGAGAAGCACCTGAAAAAATGTTCAGC
ATCCTTAATCATCAGAGAAATGCAAATCAAAACAACCCTGAGATTCCACC
TCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGC
TGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTG
CAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAAC
TGGATATAGTACTACCGGAGGATCCTGCAATACCTCTCCTGGGCATATAT
AGCATATATAGCATATATATATATGTATATATATGTGTGTGTATATATAT
ATATATATATATATGCCCCCTTTGATATATATGTATATGTGCATTTTTTT
TTATATATTTGTCCCTCCATTGTATTTTTTATCCTTTTTGCGAGTTTTTT
TATCCATTCTTTCTCTGTACATATCCTCTTTCACCTCTTTGAGAGCGTGT
TCTAGTCTGCTTCTCGCGCGCTTATTTTGTCATGTGTTTCTTCTTTTACC
TCATCTGTTTGTCTTTTCCTTTTCTTCCTGCTCCTACGTGTCTTTATTCT
TCCGCCTTTTCTGTCGCCGTTACTTTTTGCGTGTCCGCTTTTCTTTTCCC
CTCTTTTTTCTTTTTCCCCTATTTTTCTCTCCTACTTTTGGTGAT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTGCTTCCTCGTCAAGGCATCTCTTGGT
TGGACTGGATATCGTTATTGCCACTCACCGACCTTCTCTTCTGGCTTTAG
AAGCAGCACGTGACCCTAGAAAGGCATAGGTGAAGTGTGATTCTACTTCA
CCTGGGAGGAGATCTGATGTATTTCATCATTAGACTCCCGTGGAAATATA
CAATAAAAGAGGGGATCTGGTTATCGCCAGAGGCAAAGTACCACTAACTC
ATCCCTAAAGATTGCTTTTTGATTAAGGGGCTCTTGCTGTAAGGCTGCTC
AGCCCTTCTTGCTGCTGATATGAACTGCTATTCTTGGCTGTATCACTGAA
CTTGAACATCAGATCCCCCCTTTTTAAAGAAACAGCAATTACATTAAGGA
GTCCTCATGTGGGGTGTAATTTCTTGACAATATCAAGTAGAATTCAATAA
GCAGACATAACTTTGTGCCATAGAGTTAGATCGACATTTGTAAGAGAGAG
AAGGGGGTAACTGTACCCCAAATGTTTCACAGGTAAATGAAAACGTGTTT
AATCCAGGCCTGACTGCCCTTTTTCTATAACTGATAGGCAGTCTGATGAA
TTGTCACGCTTATAACATGGACAGTGCTTTCCTTCTTCCCTCACTCCCAC
AAGGTTTAAACTAGTGTGCTCTTACN

Query= MSMg01no059_c16.g1 MSMg01no059_c16.g1 CHROMAT_FILE:
MSMg01no059_c16.g1 PHD_FILE: MSMg01no059_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:36 2005
         (499 letters)



>mm_chr4_31259508_31260406
          Length = 899

 Score =  895 bits (463), Expect = 0.0
 Identities = 490/499 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgcttcctcgtcaaggcatctcttggttggactggatatcgttattgccactcaccga 60
           ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 699 cttgcttcctcatcaaggcatctcctggttggactggatatcgttattgccactcaccga 640

                                                                       
Query: 61  ccttctcttctggctttagaagcagcacgtgaccctagaaaggcataggtgaagtgtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ccttctcttctggctttagaagcagcacgtgaccctagaaaggcataggtgaagtgtgat 580

                                                                       
Query: 121 tctacttcacctgggaggagatctgatgtatttcatcattagactcccgtggaaatatac 180
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 579 tctacttcacctgggaggagatctgatgtatttcatcattagagtcccgtggaaatatac 520

                                                                       
Query: 181 aataaaagaggggatctggttatcgccagaggcaaagtaccactaactcatccctaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aataaaagaggggatctggttatcgccagaggcaaagtaccactaactcatccctaaaga 460

                                                                       
Query: 241 ttgctttttgattaaggggctcttgctgtaaggctgctcagcccttcttgctgctgatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttgctttttgattaaggggctcttgctgtaaggctgctcagcccttcttgctgctgatat 400

                                                                       
Query: 301 gaactgctattcttggctgtatcactgaacttgaacatcagatcccccctttttaaagaa 360
           |||||||||||||||||||||||||||||||||||||||||||   |  |||||||||||
Sbjct: 399 gaactgctattcttggctgtatcactgaacttgaacatcagattttctttttttaaagaa 340

                                                                       
Query: 361 acagcaattacattaaggagtcctcatgtggggtgtaatttcttgacaatatcaagtaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 acagcaattacattaaggagtcctcatgtggggtgtaatttcttgacaatatcaagtaga 280

                                                                       
Query: 421 attcaataagcagacataactttgtgccatagagttagatcgacatttgtaagagagaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 279 attcaataagcagacataactttgtgccatagagttagatcgacatttgtaagagagagt 220

                              
Query: 481 agggggtaactgtacccca 499
           |||||||||||||||||||
Sbjct: 219 agggggtaactgtacccca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space:   434721
Effective search space used:   434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)