XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATT
TCTTACCCGTCAATAACTACTTTTAAGACCATCACAAAACAAAGCCAACC
AGTGAATAGATAAAACCACACTGGTAAAACAGCTCACTGGGTAAAGTGCT
TGCCTCTTAATCATGAGGAACTGAATTTGATTGCCAAAACCCATGTAGAA
TACCAATGCTGAGGTGTGTACTTGCAGTGTTGGGGTGGTAGGCAAGGCAG
GATTCCTGGGACTCATTGGTCAGCCAGTCTAGCCTAAATGGGGGCTGGAC
AGAGCTTCCAATGGTGACATTTGATGTTGTCCTCTGCTCCACACTGCACT
TGCACATACATTTGTATCCACATAAAGTCCATATATATATATAACTAAAA
ATAACCATACCCTGTTGTGGATGAGGGAAAAGCTGATGAGGCCTCACCCC
TGGCAGAGGGACTAAAGTGTCCCCTGAAAGATAAATGGGAAAGCATGATG
TGGTATACATCCTTTTAGCCCTGGAAAGGAAGAAAATTCTGATTTATACC
ATTGCATGGAAGAAGTTTGAAAACATGCACAGTAAGTAAAATATGCTGGT
TATCTTACTTACAATATATACTTGATAAATATTGCCTAAATTTCTATTTA
GTTTGAGAGACCTACACTAGCAAAATTCACACAGCAGATAGCAGAAAGAT
GTTTCCCCAGGCTTATAATCCAGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAATGG
GGTTATTTGATTTTATGGAGCCCACCTTCTTGTGTTCTTTATATATATTG
GATATTAGTTCCCTATCTGACTTAGGATAGGTAAAGATCCTTTCCCAATC
TGTTGGTGGTCTTTTTGTCTTATTGATGATGTCTTTTGCCTTGCAGATGC
TTTGCAATTTTATGAGGTCCCATTTGTAGATTCTCAATCTTTCAGCACAA
TTCATTGCTCTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAG
GCTTTTCCCCACTTTCTCCCCTAAACCTGATAAACAGCTTCAGTGAAGTA
GCTAGACACAAAATTAACTCTAACAAATCAATGGCATTTCTCTAAAGGAA
GGATAAATATGCTGACAAAGAAATTAGGCAAACAACACCCTTCACAATAG
TCACAAATAATATAAAATACCTTGGTGTGACTCTAACAAAGGAAGTGAAA
GATCTGTATGATAAGAACTTTCAGTCTCTGAAGATAGAAATTAAAGAAGA
TCTCAGAAGATGGATAGATCTCCCATGCTCATGTATTGTCAGGATCAATA
TAGAAAAATTGTGTATCTTGCCCAAGCAATTCTAAGATTCAATGCAATCC
CCATCTAAATTCCAACTCACTTCTTTCATAAAT

Query= MSMg01no061_g18.b1 MSMg01no061_g18.b1 CHROMAT_FILE:
MSMg01no061_g18.b1 PHD_FILE: MSMg01no061_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:23 2005
         (642 letters)



>mm_chr4_14384358_14385399
          Length = 1042

 Score = 1187 bits (614), Expect = 0.0
 Identities = 632/638 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatttcttacccgtcaataactacttttaagaccatcacaaaacaaagccaacca 64
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttcttatttgtcaataactacttttaagaccatcacaaaacaaagccaacca 264

                                                                       
Query: 65  gtgaatagataaaaccacactggtaaaacagctcactgggtaaagtgcttgcctcttaat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgaatagataaaaccacactggtaaaacagctcactgggtaaagtgcttgcctcttaat 324

                                                                       
Query: 125 catgaggaactgaatttgattgccaaaacccatgtagaataccaatgctgaggtgtgtac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgaggaactgaatttgattgccaaaacccatgtagaataccaatgctgaggtgtgtac 384

                                                                       
Query: 185 ttgcagtgttggggtggtaggcaaggcaggattcctgggactcattggtcagccagtcta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgcagtgttggggtggtaggcaaggcaggattcctgggactcattggtcagccagtcta 444

                                                                       
Query: 245 gcctaaatgggggctggacagagcttccaatggtgacatttgatgttgtcctctgctcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctaaatgggggctggacagagcttccaatggtgacatttgatgttgtcctctgctcca 504

                                                                       
Query: 305 cactgcacttgcacatacatttgtatccacataaagtccatatatatatataactaaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cactgcacttgcacatacatttgtatccacataaagtccatatatatatataactaaaaa 564

                                                                       
Query: 365 taaccataccctgttgtggatgagggaaaagctgatgaggcctcacccctggcagaggga 424
           ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaccatattttgttgtggatgagggaaaagctgatgaggcctcacccctggcagaggga 624

                                                                       
Query: 425 ctaaagtgtcccctgaaagataaatgggaaagcatgatgtggtatacatccttttagccc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctaaagtgtcccctgaaagataaatgggaaagcatgatgtggtatacatccttttagccc 684

                                                                       
Query: 485 tggaaaggaagaaaattctgatttataccattgcatggaagaagtttgaaaacatgcaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggaaaggaagaaaattctgatttataccattgcatggaagaagtttgaaaacatgcaca 744

                                                                       
Query: 545 gtaagtaaaatatgctggttatcttacttacaatatatacttgataaatattgcctaaat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtaagtaaaatatgctggttatcttacttacaatatatacttgataaatattgcctaaat 804

                                                 
Query: 605 ttctatttagtttgagagacctacactagcaaaattca 642
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttctatttagtttgagagacctacactagcaaaattca 842


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)