Query= MSMg01no061_h02.b1 MSMg01no061_h02.b1 CHROMAT_FILE:
MSMg01no061_h02.b1 PHD_FILE: MSMg01no061_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:25 2005
(204 letters)
>mm_chr4_151678988_151679592
Length = 605
Score = 381 bits (197), Expect = e-110
Identities = 203/205 (99%), Gaps = 1/205 (0%)
Strand = Plus / Minus
Query: 1 tctgtcaactctggctgcattac-acacagaaccagccacttgcctgttctctccagcct 59
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 405 tctgtcaactctggctgcattacaacacagaaccagccacttgcctgttctctccagcct 346
Query: 60 gacaaggtcctacagtatctcaatattgagcactcactcatattaaccttcatattaacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gacaaggtcctacagtatctcaatattgagcactcactcatattaaccttcatattaacc 286
Query: 120 ttcaccatcctcttggccagagccacaccctccatccccgcttccttcccagggacctct 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 285 ttcaccatcctcttggccagagccacaccctccatcccggcttccttcccagggacctct 226
Query: 180 gagtactggtgggacagacctgcag 204
|||||||||||||||||||||||||
Sbjct: 225 gagtactggtgggacagacctgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 605
Length adjustment: 8
Effective length of query: 196
Effective length of database: 597
Effective search space: 117012
Effective search space used: 117012
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no061_h02.g1 MSMg01no061_h02.g1 CHROMAT_FILE:
MSMg01no061_h02.g1 PHD_FILE: MSMg01no061_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:25 2005
(360 letters)
>mm_chr4_151520383_151521142
Length = 760
Score = 644 bits (333), Expect = 0.0
Identities = 348/353 (98%)
Strand = Plus / Plus
Query: 1 cactcccaaggccagaggtcacatgggcacacagaccctgaccccagttcttaatatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactcccaaggccagaggtcacatgggcacacagaccctgaccccagttcttaatatccc 260
Query: 61 ctcttgcctgagctcaacctggcagccatacagagatcccttcttatcatcctgatcaca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ctcttgcctgagctcaacctggcagccatacagagatcccttcttatcatcctggtcaca 320
Query: 121 gaccatgacagggcttggagcccgggctctctgtctaattcccggagattcatggtgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccatgacagggcttggagcccgggctctctgtctaattcccggagattcatggtgact 380
Query: 181 cctggacagtctggtagttcctcaaaggggccatctggcacagggcccaagcttacttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctggacagtctggtagttcctcaaaggggccatctggcacagggcccaagcttacttag 440
Query: 241 cacctgttctggtttgggaggggtcagggtatccaagtgctcacctcacaagtgtcacag 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacctggcctggtttgggaggggtcagggtatccaagtgctcacctcacaagtgtcacag 500
Query: 301 ccccgatggagtcttcttacacatgggaatctcagcccatgaaccacgctagg 353
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ccccgatggagtcttcttacacatgggaatctcagcccatgaaggacgctagg 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
