Query= MSMg01no063_f20.b1 MSMg01no063_f20.b1 CHROMAT_FILE:
MSMg01no063_f20.b1 PHD_FILE: MSMg01no063_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:41 2005
(278 letters)
>mm_chr4_31320127_31320804
Length = 678
Score = 514 bits (266), Expect = e-150
Identities = 272/274 (99%)
Strand = Plus / Minus
Query: 5 gaattctattgcaaattaattatattaactatattgaaatgagctgtgaaaacagaggtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaattctattgcaaattaattatattaactatattgaaatgagctgtgaaaacagaggtg 251
Query: 65 tctgtgtctaactctacaagattcttatttaaagcagtatatatacatagtatagtgcag 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctgtgtctaaatctacaagattcttatttaaagcagtatatatacatagtatagtgcag 191
Query: 125 catagtgcagtatagtgcagtatatatagtgcagcatagtatggtatggtatagtacagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 catagtgcagtatagtgcagtatatatagtgcagcatagtatggtatggtatagtacagt 131
Query: 185 gcactatagtacagtacagtatagtatagagatatttgaggttctttagaactattgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gcactatagtacagtacagtatagtatagagatatttgaggttctttagaactattgtgt 71
Query: 245 gcatttgccattgacttaagcaatgttactctgg 278
|||||||| |||||||||||||||||||||||||
Sbjct: 70 gcatttgcaattgacttaagcaatgttactctgg 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_f20.g1 MSMg01no063_f20.g1 CHROMAT_FILE:
MSMg01no063_f20.g1 PHD_FILE: MSMg01no063_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:41 2005
(147 letters)
>mm_chr4_31189173_31189718
Length = 546
Score = 253 bits (131), Expect = 3e-72
Identities = 143/147 (97%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 1 ttttacaatgtacagtcccattagctatttacactgtcctaaatatctcgaggcaagtag 60
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ttttacagtgtacagtcccattagctatttacactgtcctaaatatct-gaggcaagtag 259
Query: 61 cttcaaagattatataattttatccttcatggtttcagaggtttcaggccatggtcactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 260 cttcaaagattatataattttatccttcatggtttcagaggtttcaggccatgctcactt 319
Query: 121 gggtctgctgcttccgggcctttacac 147
|||||||||||||| ||||||||||||
Sbjct: 320 gggtctgctgcttctgggcctttacac 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 546
Length adjustment: 8
Effective length of query: 139
Effective length of database: 538
Effective search space: 74782
Effective search space used: 74782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
