Query= MSMg01no063_j13.b1 MSMg01no063_j13.b1 CHROMAT_FILE:
MSMg01no063_j13.b1 PHD_FILE: MSMg01no063_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:01 2005
(290 letters)
>mm_chr4_127646085_127646774
Length = 690
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 agagaagcgaccggccagaggtattccaggtcaatttccggccaagtgcagactggaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaagcgaccggccagaggtattccaggtcaatttccggccaagtgcagactggaagt 260
Query: 61 agagtctgtctccatgaattcggtgtgacctggcagggaaggggctatctactggaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagtctgtctccatgaattcggtgtgacctggcagggaaggggctatctactggaaatt 320
Query: 121 gctgctgacctttgatccagaaagtggacaatcagctacttggccactgagagagctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgctgacctttgatccagaaagtggacaatcagctacttggccactgagagagctgag 380
Query: 181 tgtagccccaaggttccctgtgccaaggcactgtcccaaagcagatggcagtgaacgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagccccaaggttccctgtgccaaggcactgtcccaaagcagatggcagtgaacgggg 440
Query: 241 caaaggagcccagtgccactgagcagactagccacaggattctggctgta 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaaggagcccagtgccactgagcagactagccacaggattctggctgta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_j13.g1 MSMg01no063_j13.g1 CHROMAT_FILE:
MSMg01no063_j13.g1 PHD_FILE: MSMg01no063_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:01 2005
(253 letters)
>mm_chr4_127796245_127796895
Length = 651
Score = 371 bits (192), Expect = e-107
Identities = 205/210 (97%), Gaps = 2/210 (0%)
Strand = Plus / Minus
Query: 44 cctcgctgaaatgtctgatgtgctcacacacacagtgctcagcttagaagagacacagat 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cctcgctgaaatgtctgatgtgctcacacacacagtgctcagcttagaagagacacagat 396
Query: 104 gccctcaggtcatccttgagagccttgtggagaattctgggaaatgtgagtcctgaggtg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gccctcaggtcatccttgagagccttgtggagaattctgggaaatgtgagtcctgaggtg 336
Query: 164 ggagaatgaagtggtatttaggaggcagcaaggccagaggcatcttgggggagggtgctc 223
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggagaatgaagtggtatttagggggcagcaaggccagaggcatcttgggggagggtgctc 276
Query: 224 tgcgtcacactgagaaagatccaggcttca 253
|| || |||| ||||||||||||||||||
Sbjct: 275 tgggtgacac--agaaagatccaggcttca 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 651
Length adjustment: 9
Effective length of query: 244
Effective length of database: 642
Effective search space: 156648
Effective search space used: 156648
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
