Query= MSMg01no066_a09.b1 MSMg01no066_a09.b1 CHROMAT_FILE:
MSMg01no066_a09.b1 PHD_FILE: MSMg01no066_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:41 2005
(276 letters)
>mm_chr4_76697225_76697900
Length = 676
Score = 485 bits (251), Expect = e-142
Identities = 266/271 (98%)
Strand = Plus / Plus
Query: 6 gaattctcttatagtctcattttatttctgtttttatcagccttgcaaatgttattccat 65
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcttatagcctgattttatttctgtttttatcagccttgcaaatgttattccat 265
Query: 66 tgatgtacaaaaataaagctattaaattttgcctaacagccagcccttatgattatatgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgatgtacaaaaataaagctattaaattttgcctaacagccagcccttatgattatatgt 325
Query: 126 ttctctatgtttataccacctgcatgataagcctcaagtccaaatgaacaggtaagtgct 185
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 326 ttctctatgtttataccacctgcatgagaagcctcaagtccaaatgaacaggtaagtgct 385
Query: 186 tatctgaatgctttattacttctatttacaaaatccaccatgttactttagctcttatct 245
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 386 tatctgaatgctttattacttcaatttacaaaatccaccatgttactttagctcttatct 445
Query: 246 gctcacctctgcattggacaaccatttagat 276
| |||||||||||||||||||||||||||||
Sbjct: 446 gatcacctctgcattggacaaccatttagat 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_a09.g1 MSMg01no066_a09.g1 CHROMAT_FILE:
MSMg01no066_a09.g1 PHD_FILE: MSMg01no066_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:41 2005
(190 letters)
>mm_chr4_76800947_76801538
Length = 592
Score = 263 bits (136), Expect = 5e-75
Identities = 179/194 (92%), Gaps = 4/194 (2%)
Strand = Plus / Minus
Query: 1 tactagccaggactacacagtaagatactgtttcaaaacaaaaacaaaaacaaaaacaaa 60
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 461 tactagccaggattacacagtaagacactgtttcaaaacaaaaacaaaaacaaaaacaaa 402
Query: 61 a-acaaataaaa--cccgaatttgtttttaaaaaatcatgtttaatga-ttttctcttag 116
| | ||| |||| ||| ||||||||||| |||||||||||||||||| ||||||| ||
Sbjct: 401 acaaaaacaaaaacccctaatttgttttttaaaaatcatgtttaatgatttttctcagag 342
Query: 117 acatctcagatacaaacttcaaaatttgttttccctaaaggaaaatgctttttcaaaaat 176
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acatctcagagacaaacttcaaaatttgttttccctaaaggaaaatgctttttcaaaaat 282
Query: 177 ttctactgatactg 190
||| | ||||||||
Sbjct: 281 ttcaattgatactg 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 592
Length adjustment: 8
Effective length of query: 182
Effective length of database: 584
Effective search space: 106288
Effective search space used: 106288
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
