Query= MSMg01no067_m18.b1 MSMg01no067_m18.b1 CHROMAT_FILE:
MSMg01no067_m18.b1 PHD_FILE: MSMg01no067_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:00 2005
(311 letters)
>mm_chr4_111264556_111265267
Length = 712
Score = 549 bits (284), Expect = e-161
Identities = 304/314 (96%), Gaps = 7/314 (2%)
Strand = Plus / Plus
Query: 5 gaattcatcatgctgcacaatggctaccatctgcctaactctgtactccctcccttttcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatcatgctgcaaaatggctaccatctgcctaactctgtactccctcccttttcc 264
Query: 65 tatacccctgtctcccatccctcactccttctatctgtctacacatctactgtgctgtgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatacccctgtctcccatccctcactccttctatctgtctacacatctactgtgctgtgc 324
Query: 125 tctggggacacagacttaaaggacacagttgctgctcttaggcagtgctcacccgggagg 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 tctggggacacagacttaaaggacacagttgctgctcttaggcagtgctcgcccgggagg 384
Query: 185 ggaaggcagaaaagggaccctgtaccataggtatta-tctaaatgccaaagactgaggaa 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 ggaaggcagaaaagggaccctgtaccataggtattagtctaaatgccaaagactgaggaa 444
Query: 244 gctcatagaagaagttgcacatctcacaaagggaactgatatatatatatatat------ 297
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcccatagaagaagttgcacatctcacaaagggaactgatatatatatatatatatatat 504
Query: 298 catgtgtgtgtgtg 311
||||||||||||||
Sbjct: 505 catgtgtgtgtgtg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_m18.g1 MSMg01no067_m18.g1 CHROMAT_FILE:
MSMg01no067_m18.g1 PHD_FILE: MSMg01no067_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:00 2005
(220 letters)
>mm_chr4_111379074_111379693
Length = 620
Score = 418 bits (216), Expect = e-121
Identities = 219/220 (99%)
Strand = Plus / Minus
Query: 1 tatgggttagccttcaagccaaggacaggagcatccctgcctcagcccagaggtggcttt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tatgagttagccttcaagccaaggacaggagcatccctgcctcagcccagaggtggcttt 361
Query: 61 gtgtgccactcctgtccccctgctgtgactgactctaggtctcagcactttcttttgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtgtgccactcctgtccccctgctgtgactgactctaggtctcagcactttcttttgcct 301
Query: 121 ctgcattaaagtcaggtgctagtccctaaaccctggccatagaatgttgggaaaagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctgcattaaagtcaggtgctagtccctaaaccctggccatagaatgttgggaaaagattc 241
Query: 181 aatgtgagaggcagtacttttagtagtgatatctctggaa 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatgtgagaggcagtacttttagtagtgatatctctggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
