MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-071I02
Chromosome	4 (Build37)
Map Location	53,676,091 - 53,676,408
singlet/doublet	singlet
Overlap gene	LOC666483
Upstream gene	LOC100040908, LOC666761, Olfr275, Olfr274-ps1, Olfr273, LOC230185, Olfr272, Olfr271-ps1, Olfr270, 1700054F22Rik, Nipsnap3a, Abca1, 4930522O17Rik, AI427809, LOC100041197, Slc44a1, Fsd1l
Downstream gene	Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280, LOC666901, LOC100041303
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040908 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC666761 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 4 Proteins pseudo : _no_value

name	Olfr275 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258857 MGI:3030109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr274-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404368 MGI:3030108
definition	note : olfactory receptor 274, pseudogene 1 pseudo : _no_value

name	Olfr273 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258821 MGI:3030107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC230185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Olfr272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258836 MGI:3030106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr271-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258856 MGI:3030105
definition	gene_synonym : MOR262-3 note : olfactory receptor 271, pseudogene 1 pseudo : _no_value

name	Olfr270 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258600 MGI:3030104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700054F22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73398 MGI:1920648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins

name	Nipsnap3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66536 MGI:1913786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11303 MGI:99607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930522O17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78180 MGI:1925430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	AI427809 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381524 MGI:2140270
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041197 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041197
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Slc44a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100434 MGI:2140592
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fsd1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319636 MGI:2442443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666483 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 1 Protein pseudo : _no_value

name	Fcmd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246179 MGI:2179507
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tal2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21350 MGI:99540
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins

name	Tmem38b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52076 MGI:1098718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670124 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100041280 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC666901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100041303 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040908 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252389 GeneID:100040908
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040908 transcript_id : XM_001475671.1

name	Olfr275 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129148 GeneID:258857 MGI:3030109
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 275 transcript_id : NM_146858.1

name	Olfr273 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129212 GeneID:258821 MGI:3030107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 273 transcript_id : NM_146824.1

name	Olfr272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129180 GeneID:258836 MGI:3030106
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 272 transcript_id : NM_146839.1

name	Olfr270 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33238913 GeneID:258600 MGI:3030104
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 270 transcript_id : NM_146607.1

name	1700054F22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94371770 GeneID:73398 MGI:1920648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins product : RIKEN cDNA 1700054F22 gene transcript_id : XM_485380.4

name	Nipsnap3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892409 GeneID:66536 MGI:1913786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nipsnap homolog 3A (C. elegans) transcript_id : NM_025623.2

name	Abca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90568037 GeneID:11303 MGI:99607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family A (ABC1), member 1 transcript_id : NM_013454.3

name	4930522O17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252392 GeneID:78180 MGI:1925430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930522O17 gene transcript_id : XM_898933.3

name	AI427809 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348551 GeneID:381524 MGI:2140270
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI427809 transcript_id : NM_001033454.2

name	Slc44a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46358372 GeneID:100434 MGI:2140592
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 44, member 1 transcript_id : NM_133891.2

name	Fsd1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248508 GeneID:319636 MGI:2442443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III and SPRY domain containing 1-like transcript_id : NM_176966.3

name	Fcmd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369664 GeneID:246179 MGI:2179507
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fukuyama type congenital muscular dystrophy homolog (human) transcript_id : NM_139309.3

name	Tal2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369795 GeneID:21350 MGI:99540
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell acute lymphocytic leukemia 2 transcript_id : NM_009317.3

name	LOC435784 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252399 GeneID:435784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to Rps15a protein transcript_id : XM_001476039.1

name	Tmem38b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312531 GeneID:52076 MGI:1098718
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 38B transcript_id : NM_028053.1

name	LOC100041280 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252401 GeneID:100041280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001476090.1

name	LOC100041303 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252403 GeneID:100041303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041303 transcript_id : XM_001476128.1

name	LOC100040908 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252390 GeneID:100040908
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475721.1

name	Olfr275 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129149 CCDS:CCDS18183.1 GeneID:258857 MGI:3030109
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2N78B-7168533-7167574; olfactory receptor MOR262-2 product : olfactory receptor 275 protein_id : NP_667069.1

name	Olfr273 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129213 CCDS:CCDS18184.1 GeneID:258821 MGI:3030107
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7137430-7138383; olfactory receptor MOR262-8 product : olfactory receptor 273 protein_id : NP_667035.1

name	Olfr272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129181 CCDS:CCDS18185.1 GeneID:258836 MGI:3030106
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7084885-7085844; olfactory receptor MOR262-7 product : olfactory receptor 272 protein_id : NP_667050.1

name	Olfr270 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238914 GeneID:258600 MGI:3030104
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2N78B-7025964-7025020; olfactory receptor MOR262-9 product : olfactory receptor 270 protein_id : NP_666818.1

name	1700054F22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371771 GeneID:73398 MGI:1920648
definition	codon_start : 1 product : hypothetical protein LOC73398 protein_id : XP_485380.4

name	Nipsnap3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385084 CCDS:CCDS18186.1 GeneID:66536 MGI:1913786
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 note : NIPSNAP-related protein; nipsnap homolog 3B product : nipsnap homolog 3A protein_id : NP_079899.1

name	Abca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90568038 CCDS:CCDS18187.1 GeneID:11303 MGI:99607
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0043231 - intracellular membrane-bound organelle [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008203 - cholesterol metabolism [Evidence IDA]; GO:0030301 - cholesterol transport [Evidence IDA]; GO:0042158 - lipoprotein biosynthesis [Evidence IMP]; GO:0006911 - phagocytosis, engulfment [Evidence IMP]; GO:0045332 - phospholipid translocation [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATP-binding cassette 1 product : ATP-binding cassette 1, sub-family A, member 1 protein_id : NP_038482.3

name	4930522O17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94371773 GeneID:78180 MGI:1925430
definition	codon_start : 1 product : hypothetical protein LOC78180 protein_id : XP_904026.2

name	AI427809 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701973 GeneID:381524 MGI:2140270
definition	codon_start : 1 product : hypothetical protein LOC381524 protein_id : NP_001028626.1

name	Slc44a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46358373 CCDS:CCDS18189.1 GeneID:100434 MGI:2140592
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015220 - choline transporter activity [Evidence IDA] GO_process : GO:0015871 - choline transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CDW92 antigen protein_id : NP_598652.2

name	Fsd1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892791 GeneID:319636 MGI:2442443
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cystatin and DUF19 domain containing 1; coiled-coil domain containing 10; FSD1 N-terminal like product : cystatin and DUF19 domain-containing protein 1 protein_id : NP_795940.1

name	Fcmd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21314856 CCDS:CCDS18191.1 GeneID:246179 MGI:2179507
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Fukuyama type congenital muscular dystrophy (fukutin) product : Fukuyama type congenital muscular dystrophy homolog protein_id : NP_647470.1

name	Tal2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678217 CCDS:CCDS18192.1 GeneID:21350 MGI:99540
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : T-cell acute lymphocytic leukemia 2 protein_id : NP_033343.1

name	LOC435784 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252400 GeneID:435784
definition	codon_start : 1 product : similar to Rps15a protein protein_id : XP_001476089.1

name	Tmem38b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312532 CCDS:CCDS18193.1 GeneID:52076 MGI:1098718
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 note : Mitsugumin33B product : transmembrane protein 38B protein_id : NP_082329.1

name	LOC100041280 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252402 GeneID:100041280
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476140.1

name	LOC100041303 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252404 GeneID:100041303
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476178.1

name	LOC230185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230185
definition	number : 1 pseudo : _no_value

name	LOC230185 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:230185
definition	number : 2 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 1 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 2 pseudo : _no_value

name	LOC100041197 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041197
definition	number : 3 pseudo : _no_value

name	LOC670124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670124
definition	number : 1 pseudo : _no_value

name	LOC670124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670124
definition	number : 2 pseudo : _no_value

name	LOC670124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670124
definition	number : 3 pseudo : _no_value

name	LOC670124 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:670124
definition	number : 4 pseudo : _no_value

name	LOC666901 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666901
definition	number : 1 pseudo : _no_value

name	LOC666901 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666901
definition	number : 2 pseudo : _no_value

name	LOC666761 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252396 GeneID:666761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 4 Proteins product : similar to alpha NAC/1.9.2. protein pseudo : _no_value transcript_id : XR_032444.1

name	LOC666483 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252395 GeneID:666483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 ESTs, 1 Protein product : similar to single-stranded DNA binding protein 2 pseudo : _no_value transcript_id : XR_032465.1

clone name	MSMg01-327J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-424K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071I02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-289N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164L04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-071I02.T7 (MSMg01no071_i02.b1)	MSMg01-071I02.TJ (MSMg01no071_i02.g1)
ACC	AG295272	AG295273
length	1,051	718
length of high quality (start - end)	---	318 (74 - 391)
definition	CHROMAT_FILE: MSMg01no071_i02.b1 PHD_FILE: MSMg01no071_i02.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:18:56 2005	CHROMAT_FILE: MSMg01no071_i02.g1 PHD_FILE: MSMg01no071_i02.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:18:56 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	plural
sequence	CCCCCCCCCCCGNCGCCCCCGCCCCCGCGCGGCGCGCCCCCCGGTTCCCG CGCCCCGCCGTCCGGNCTTNCCTANCTCCTTNCTCTCNNTTCTTTTTTTT TCTCTTTGTTTTTTTTTTTTCTTGTCGCTTTTTCTTTTTTTGCTTTTTTT TTTTTTTTGTTCTTTCTTTCCTTTCTCCTCTCGGTCTCTTCTGGCCCGGG TCAGTAACCGCATCTGCGCTCCTCTTCCTCGTCCCTCGCCGCTCTGCCGC GCCCCCGCTGTGAGCCGCGCGCGCCCCGGCCGGTGCGGGTTGGGGGGGGG GTGGGGGGCGGCGGGAGGGGGGGGGGCGGACGCCCCGGGCCGCCGCGGCG GCGGGGGCAGCGGCGTCTGGCCTCCAACGCCGACCGCACGACATGTTCAC GCCCACGAGATCGATATATATCACACGTGAGAGAGAAAAAGAGAGAGATA CAAAGATAAATAACACACCAACTCACAATAAACACAACTATTACGATAAC TCTTCTCACAACTACTTGCGCTCTTGTCTCGTGTGATTTTGTTGGTGTAG TCTTGCGCGCAGTTCGAAAAACCTTATATATCTGCTGAACTTACTTTTTA TATCTATGTTCTTTGCTATCTACTTGTATCTATGTCTCTACATTGCGCTC CCTATCTTTCTTCTATTAGATGGGCGTGCTGTGTGTGCTCCGGGTGATGG TCCGCTGAAGCGCGAGATTAGGCGTGCGAGACGCCGATTTATGTATCACA GTATAATATTACTATATTGCTATGAGTCAGTGGGCCCCCTTTCTTCTTTT AAATNNNTTTAATNCGGAACNATGCGGCGCCNTTCTNTTATTCCCNGGCG ACTCTGGTGCAGTCTCTAATTAAANAGGGGTGGNGAATTTTCCAGTTNTC NTTTAANGCNTNCACCGGNCCNNTTNAGGGTATTTTTTTGTTCGNTTATC GAGGGGANGGGCGCTCTTCCACATCTAATACCCTCATGGGAGTGGACCTG TTCTTATATCCCTCACTNTTATAAGAAAAGTTGTTGTAGTCCCTATGTCC N	CCATGAAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXTCCCAATAATCTGAGCCTGAGTAACCA GCCGGGCACTCCAAGGGATGATGATGAAATGGGGGGGAAATGTCTTAAAT CCTTTTCAGAGTGACAGTTACTCCCCCAGCATGACCATGAGTGTGTGATC CATTGCCGCGTCTCTCATGAAAACCATCATAAGTTAGCCCATCACAGAAC TACTACGGAAGAAAACTACTTGTCGTGTACAGTTAGACAAAGGAATCTCA GACAACCAGACTACCTTTTAGTTCCTGCTCTCTCCCCTATTTTGAGAATA AAGCGGGTCCAATTGTGATTCAGGCATCTGTACAGAGTAGTACATTAGCA TTGCCCCCAACTGAACTGCGATGACTATCTGTGTGTATGTGTGGGGAAGA GAATGCGTCGAATATGCAGATCTGTATGCTCTTATACGTATACGTGCATT TGACTCACTGGACATTGTAAAGTATCACATGACCTCTTAAGTACAAATAA ATAAGGAATTTTATGCCATCCTTTTCCTTCCGGTTACCCTTTAATTATTA AAGGGATGTTCCTGCCCCTTCCCCCACTAATTTGGGCTGGGGACATCCCC GGCGTTTATTTAAGTTAATTTTCTTACGGGGAACTCCAAAAGGTATGGGT TTTGTTAAATGGGCTGCC
quality values	Open. Hide. 15 15 9 9 14 25 25 14 8 8 8 3 0 3 15 19 24 25 25 20 19 15 9 9 15 10 10 8 8 8 8 8 6 6 6 6 8 9 19 19 10 9 10 8 6 8 8 8 8 6 6 6 6 8 8 6 7 6 6 9 10 8 6 6 3 0 3 18 3 0 3 10 8 3 0 3 17 17 7 7 3 0 3 7 17 8 3 0 0 3 6 6 6 6 6 13 21 19 11 7 8 6 6 6 6 7 7 14 15 24 22 25 13 13 8 15 14 15 17 15 16 18 12 8 8 6 6 8 17 16 8 10 9 9 9 12 13 24 17 19 8 8 6 6 8 10 16 18 28 23 19 17 11 11 12 17 9 7 6 6 8 6 8 13 8 8 8 8 10 10 7 7 6 6 8 10 8 10 10 15 13 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 8 8 8 10 8 10 9 9 8 8 10 8 8 8 6 6 8 6 8 8 19 8 8 8 10 12 12 9 10 10 10 10 10 11 11 8 8 8 8 8 8 8 8 10 10 8 11 8 8 8 8 8 8 8 8 8 8 13 13 20 31 28 35 24 30 17 22 9 10 10 13 10 8 8 11 11 15 11 8 8 8 8 8 8 8 8 8 10 12 16 33 33 25 18 17 14 17 12 9 9 7 6 6 8 6 8 11 10 14 17 15 26 22 18 14 15 10 8 8 6 7 8 8 8 9 10 8 8 8 8 8 8 8 8 11 8 11 11 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 11 10 9 9 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 10 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 11 8 8 8 8 8 6 6 8 8 6 6 10 8 10 9 8 8 8 8 8 6 6 6 6 6 8 8 9 9 10 9 10 8 8 8 8 8 8 8 12 12 12 8 12 8 8 8 8 10 8 8 8 6 6 6 6 8 6 12 10 10 10 8 8 8 8 8 6 7 8 8 8 8 8 8 6 6 8 6 6 8 8 10 10 10 10 8 8 8 8 8 8 11 11 11 8 8 6 6 8 8 8 6 6 8 10 16 13 10 9 9 9 8 8 6 6 8 10 8 8 8 8 8 8 8 8 15 12 8 9 9 8 8 12 12 11 8 8 8 8 8 8 8 8 10 11 10 8 8 6 6 8 8 11 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 8 10 11 10 10 8 8 8 8 8 8 8 6 6 10 11 16 15 10 7 6 6 8 8 10 10 8 8 6 6 7 7 8 8 8 8 8 8 10 11 10 8 8 8 8 6 8 6 11 6 6 6 8 8 8 9 9 9 9 8 8 10 9 9 9 8 8 8 10 10 9 9 10 8 8 11 10 19 13 13 11 9 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 10 9 8 10 8 11 9 8 6 6 6 6 8 10 10 8 8 8 8 10 8 8 6 6 8 8 8 8 8 6 6 6 8 10 15 12 8 8 8 10 8 8 8 8 6 8 6 6 8 6 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 6 6 10 8 11 12 12 11 9 8 8 8 6 6 6 6 8 6 6 8 8 8 8 8 8 10 8 8 8 8 8 10 8 8 10 8 8 8 8 9 10 6 7 7 7 6 6 8 8 6 8 7 7 6 6 3 0 0 0 3 7 6 6 6 3 0 3 7 6 6 6 3 0 3 7 6 8 8 6 6 6 6 3 0 3 6 6 3 0 3 7 7 7 7 6 8 3 0 3 6 7 7 7 8 7 7 7 7 7 7 7 8 8 8 6 8 6 6 6 7 6 6 8 8 6 3 0 3 6 6 7 6 6 6 3 0 3 6 6 6 7 7 6 6 6 6 6 6 3 0 3 3 0 3 6 6 6 3 0 3 3 0 3 0 3 6 6 6 6 3 0 3 3 0 0 3 3 0 3 6 6 6 8 8 8 8 8 8 8 8 7 7 7 8 8 3 0 3 9 9 9 6 6 6 6 6 6 6 3 0 3 8 8 6 6 6 6 6 6 6 6 6 6 10 9 9 9 9 9 8 10 9 9 6 6 6 6 6 6 6 6 9 9 9 6 6 6 6 6 6 8 6 6 6 6 6 6 6 6 6 6 6 8 8 8 8 8 8 3 0 3 8 8 8 8 8 6 6 6 7 7 8 9 9 10 9 9 9 10 10 11 10 8 8 8 6 6 6 6 6 9 3 0	Open. Hide. 7 7 7 11 6 6 8 8 18 9 9 9 13 14 16 22 22 23 26 37 30 25 27 21 22 31 32 28 32 25 18 11 9 9 9 10 9 11 11 11 11 11 12 11 11 11 19 19 9 10 10 19 21 27 33 47 53 50 26 26 20 12 15 15 19 19 11 8 14 21 24 32 30 43 33 33 28 32 42 42 43 43 29 30 29 42 29 32 23 28 29 32 32 42 44 29 30 18 16 16 22 18 24 27 32 27 27 21 27 33 33 28 30 32 38 47 41 41 50 42 46 47 47 47 50 50 47 50 50 50 50 50 57 57 57 54 54 46 46 46 42 38 29 35 37 43 44 44 44 32 36 42 43 57 42 36 36 24 36 36 52 50 52 52 52 52 57 57 57 43 43 52 52 52 43 43 35 29 39 39 47 57 38 39 28 28 33 38 38 57 57 57 57 57 57 57 57 42 42 45 45 45 57 57 57 52 52 43 43 43 31 31 43 43 43 52 52 44 44 31 28 24 43 35 35 35 43 43 52 44 44 52 52 57 57 43 26 24 24 28 42 43 42 42 43 35 44 43 43 43 52 52 52 43 43 35 35 43 43 52 52 52 43 44 43 43 43 52 52 52 50 50 37 37 35 44 43 43 28 27 27 44 38 59 43 43 23 27 27 43 44 59 57 43 42 32 37 24 32 15 30 24 32 32 35 28 28 27 44 40 57 44 57 48 48 48 59 44 59 57 44 44 41 36 44 43 46 46 48 57 46 47 43 43 43 43 43 48 59 59 59 68 59 59 59 48 57 48 48 48 57 48 50 43 40 28 28 23 28 28 28 28 36 36 36 43 46 43 41 34 34 28 25 19 17 11 11 11 22 25 36 36 39 39 43 43 30 23 12 11 11 11 13 15 13 19 15 18 23 22 19 16 15 18 15 22 22 13 15 15 21 24 27 25 18 19 16 25 20 19 11 12 12 21 31 36 39 39 39 34 28 28 28 29 37 30 28 17 20 23 17 16 19 15 15 13 15 13 21 21 24 24 26 22 13 10 13 8 8 8 8 8 15 25 19 13 10 10 13 13 20 15 16 10 15 13 11 10 9 9 8 7 8 10 9 15 9 10 9 9 10 14 9 11 10 15 9 14 12 23 16 13 13 9 9 9 15 13 10 10 10 10 10 10 13 11 9 9 9 9 9 9 9 10 16 10 12 15 21 15 24 21 15 15 14 18 18 21 15 18 20 16 11 11 8 10 10 10 8 9 9 10 12 16 12 14 14 15 14 18 21 22 14 15 15 13 14 10 11 11 11 9 9 10 8 7 7 6 8 8 8 8 8 8 8 8 8 9 13 13 13 9 13 7 8 8 8 8 8 8 8 8 11 11 9 9 10 15 13 14 19 10 12 11 11 8 9 15 12 12 13 14 21 9 8 10 8 8 8 8 10 15 10 8 8 8 8 8 8 9 10 11 11 9 9 9 12 10 13 18 7 7 6 6 8 8 10 8 8 8 8 8 8 8 10 14 17 17 23 10 10 6 7 8 8 7 8 9 8 10 10 8 8 8 8 8 6 6 8 8 10 8 9 8 8 8 8 9 9 10 9 10 10 6 6 6 8 15 15 11 10 10 10 10 12 12 12 12

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no071_i02.g1 MSMg01no071_i02.g1 CHROMAT_FILE:
MSMg01no071_i02.g1 PHD_FILE: MSMg01no071_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:56 2005
         (318 letters)



>mm_chr4_53675891_53676609
          Length = 719

 Score =  584 bits (302), Expect = e-171
 Identities = 314/318 (98%), Gaps = 1/318 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcccaataatctgagcctgagtaaccagccgggcactccaagggatgatgatgaaatggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccaataatctgagcctgagtaaccagccgggcactccaagggatgatgatgaaatggg 260

                                                                       
Query: 61  gggg-aaatgtcttaaatccttttcagagtgacagttactcccccagcatgaccatgagt 119
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggggaaatgtcttaaatccttttcagagtgacagttactcccccagcatgaccatgagt 320

                                                                       
Query: 120 gtgtgatccattgccgcgtctctcatgaaaaccatcataagttagcccatcacagaacta 179
           |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 321 gtgtgatccattgccgcgtctctcatgaaaaccatcgtaagtcagcccatcacagaacta 380

                                                                       
Query: 180 ctacggaagaaaactacttgtcgtgtacagttagacaaaggaatctcagacaaccagact 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacggaagaaaactacttgtcgtgtacagttagacaaaggaatctcagacaaccagact 440

                                                                       
Query: 240 accttttagttcctgctctctcccctattttgagaataaagcgggtccaattgtgattca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accttttagttcctgctctctcccctattttgagaataaagcgggtccaattgtgattca 500

                             
Query: 300 ggcatctgtacagagtag 317
           |||| |||||||||||||
Sbjct: 501 ggcaactgtacagagtag 518


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space:   219390
Effective search space used:   219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information