Query= MSMg01no074_f20.b1 MSMg01no074_f20.b1 CHROMAT_FILE:
MSMg01no074_f20.b1 PHD_FILE: MSMg01no074_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:42 2005
(389 letters)
>mm_chr4_148170973_148171760
Length = 788
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Plus
Query: 1 ggcagatctgctggtgtgtcacaaatggggacgttgaggcagagaaaggctcaaggtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcagatctgctggtgtgtcacaaatggggacgttgaggcagagaaaggctcaaggtcac 260
Query: 61 atagcagagggttgagctgagagtttgaacccatgtgaccaaattatatataaaacccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagcagagggttgagctgagagtttgaacccatgtgaccaaattatatataaaacccat 320
Query: 121 gctctgatacacagattattttaaaacacacacactcatacacttacgcacacacatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctgatacacagattattttaaaacacacacactcatacacttacgcacacacatgca 380
Query: 181 cacacacacataagcacagtttaatttgagcagggtgcaggtagaagaccatgaccatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacacacataagcacagtttaatttgagcagggtgcaggtagaagaccatgaccatgt 440
Query: 241 actgtatttgttataaataatggagagctggagcagcatgtgttgaggtacctagctcag 300
|||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actg-agatgggataaataatggagagctggagcagcatgtgttgaggtacctagctcag 499
Query: 301 ccctgggcaggaccacatcgaggagggctcccgagagcagaccactcctcttgttctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccctgggcaggaccacatcgaggagggctcccgagagcagaccactcctcttgttctgat 559
Query: 361 cttgttcgttgttctagacagggtctcct 389
|||||||||||||||||||||||||||||
Sbjct: 560 cttgttcgttgttctagacagggtctcct 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 788
Length adjustment: 9
Effective length of query: 380
Effective length of database: 779
Effective search space: 296020
Effective search space used: 296020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_f20.g1 MSMg01no074_f20.g1 CHROMAT_FILE:
MSMg01no074_f20.g1 PHD_FILE: MSMg01no074_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:43 2005
(243 letters)
>mm_chr4_148323919_148324561
Length = 643
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 attttgtcctgctcagagccactagctctgggaatcggatagcacccaggctcagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attttgtcctgctcagagccactagctctgggaatcggatagcacccaggctcagtcaga 384
Query: 61 atgtgaaacaggaatggatggatagagagagacctaggggtgatgtctacccaaggagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgtgaaacaggaatggatggatagagagagacctaggggtgatgtctacccaaggagaa 324
Query: 121 gaacaagcacaccattttacacatagggctgagacggcgagagcgctgggtgagcctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaacaagcacaccattttacacatagggctgagacggcgagagcgctgggtgagcctggt 264
Query: 181 ggttccgcacgtaggtttcttctccctgtctagctccggaagggaaaggaggtccaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggttccgcacgtaggtttcttctccctgtctagctccggaagggaaaggaggtccaaacc 204
Query: 241 tgg 243
|||
Sbjct: 203 tgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
