CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAGAATCCGCG
GAATTCTGAATCTCTTCTAGCTCTCACGTGGTGTCACAAAATAGATTTTC
TTTGATTTTTTTCCCTACTTAAAAGCGTAAAAAGTAAGCCTAGCTCGTGA
CTAGATAAACAGGTAGAGCTTGCTTATTCCTAGCCTAAACAGCCACAGTA
AAATAAATCAGTAATTATTTTTTAAACCATATCTGCCTTCTTGTAACACT
CTTACAGGATTCATGCCGTGTCTAGGAGAGCCCGCTTAGCACTGTCTACC
TTAAGGCTTCTGGCCTGTCCTGATGGCTCAGTCCAATCCTACCACAAACC
AGGGCTGCTGCCTTGATCCTTCAGGCACTGATTCCTGGGTTACTAGCCCT
GGCTGCCCCCCTGAAAGCTGGAATGGCCTCTGTCACTCAGGTGCTTTACT
GTACCCAATCTGTCTCTGTGTCTCCCCGTCTAACCAGGCACATTTGTCGG
CCATTTATCATCTTTATGTGGAAGGCAGGATACAGACAAGGAGGTGTCTT
CTACCCACTGCTATAAAACCAAAACCTAGGAAGATGTAGCCCTGGTGAGC
ACTCTGTCGCTTAAGGACATCTAGCATAGAGCACTCTCAGCATTAAAAAG
CCAGGCTGAATCTGGGTACAGTGGGTGTGGCCATGATCCCAGCACTCTGG
CAGATCA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAGGCTGGCCTT
GAACTCATAGAGATCCACGTGCCTCTGCCTCCCAAAGGATAGGATTAAAG
GCATGAACCACCAGCACTACTACCATCACCCCACCAGCACCAGTACCAGC
ACCAGCACCAGCACCAGCACCAGCACCAGTACCAGCACCAGCACCACCAC
TACCATCACTACTGCAGCCGCCTGGCTGTTTGTTTTAATGATTTACTTGG
GTTTTTTTTGTTGTTGTTGTTGTTTTGCTTTTTGTTTGTTTGTTTTTGTT
TTTGTTTTTTTGAGACAGGGTTTCTCTGTATAACCCTGGCTGTCCTGGAA
CTCGCTTTGTAGACCAAGCTGGCCTTGAACTCAGAAATCTGTCTGCCTCT
GCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCACCACCGCCCGGCGATT
TACTTATTTTTATTTATGTGTGAGAGTGCAGGTGCCTACAGAGGCCAGAA
GAGGGCACTGGGTCTCTTGTAACGTATAGGTGGTTGAATGCTGAGAACTA
ACCTCTAGTCCTTTGTAAGAGCAGCCAGGGCTCTTAACCACTGAGCCATC
TCTTTAGCCACTTGTAAAGCGTTAAAAGAACTCTCCTATTGAAAAATAGT
CGTATCCCAGG

Query= MSMg01no075_a17.b1 MSMg01no075_a17.b1 CHROMAT_FILE:
MSMg01no075_a17.b1 PHD_FILE: MSMg01no075_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:36 2005
         (591 letters)



>mm_chr4_55133364_55134354
          Length = 991

 Score = 1135 bits (587), Expect = 0.0
 Identities = 590/591 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacgtggtgtcacaaaatagattttctttgatttttttccctacttaaaagcgtaaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgtggtgtcacaaaatagattttctttgatttttttccctacttaaaagcgtaaaaag 260

                                                                       
Query: 61  taagcctagctcgtgactagataaacaggtagagcttgcttattcctagcctaaacagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagcctagctcgtgactagataaacaggtagagcttgcttattcctagcctaaacagcc 320

                                                                       
Query: 121 acagtaaaataaatcagtaattattttttaaaccatatctgccttcttgtaacactctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtaaaataaatcagtaattattttttaaaccatatctgccttcttgtaacactctta 380

                                                                       
Query: 181 caggattcatgccgtgtctaggagagcccgcttagcactgtctaccttaaggcttctggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caggattcatgccgtgtctaggagagcccgcttagcactgtctaccttaaggcttctggc 440

                                                                       
Query: 241 ctgtcctgatggctcagtccaatcctaccacaaaccagggctgctgccttgatccttcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtcctgatggctcagtccaatcctaccacaaaccagggctgctgccttgatccttcag 500

                                                                       
Query: 301 gcactgattcctgggttactagccctggctgcccccctgaaagctggaatggcctctgtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcactgattcctgggttactagccctggctgcccccctgaaagctggaatggcctctgtc 560

                                                                       
Query: 361 actcaggtgctttactgtacccaatctgtctctgtgtctccccgtctaaccaggcacatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actcaggtgctttactgtacccaatctgtctctgtgtctccccgtctaaccaggcacatt 620

                                                                       
Query: 421 tgtcggccatttatcatctttatgtggaaggcaggatacagacaaggaggtgtcttctac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtcggccatttatcatctttatgtggaaggcaggatacagacaaggaggtgtcttctac 680

                                                                       
Query: 481 ccactgctataaaaccaaaacctaggaagatgtagccctggtgagcactctgtcgcttaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 ccactgctataaaaccaaaacctaggaagatgtagccctggtgagcactctgtcgtttaa 740

                                                              
Query: 541 ggacatctagcatagagcactctcagcattaaaaagccaggctgaatctgg 591
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggacatctagcatagagcactctcagcattaaaaagccaggctgaatctgg 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space:   569961
Effective search space used:   569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)