Query= MSMg01no076_b07.b1 MSMg01no076_b07.b1 CHROMAT_FILE:
MSMg01no076_b07.b1 PHD_FILE: MSMg01no076_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(521 letters)
>mm_chr4_21794356_21795276
Length = 921
Score = 1000 bits (517), Expect = 0.0
Identities = 520/521 (99%)
Strand = Plus / Minus
Query: 1 acatggtggcttacaaccatccctctcctggtgtgtctggagatagttacaagtgaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 acatggtggcttacaaccatccctctcctggtgtgtctggagatagttacaagtgaactc 539
Query: 61 ataaaagtaaaataaagctttgaaaacatgtgggaaaaaaatgaattaatgttctcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ataaaagtaaaataaagctttgaaaacatgtgggaaaaaaatgaattaatgttctcaagc 479
Query: 121 ctcatatacactaaaacattttaatacttctttattgttattgtgtgtatgggtgtgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ctcatatacactaaaacattttaatacttctttattgttattgtgtgtatgggtgtgtag 419
Query: 181 gctcatgtgcaaaggttagagaacgatgtttggagtcagccttctaaggcctgacctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gctcatgtgcaaaggttagagaacgatgtttggagtcagccttctaaggcctgacctcag 359
Query: 241 gttcgcaggcttacatgaccttttgctgtttggggaagtactattcagtgattttactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gttcgcaggcttacatgaccttttgctgtttggggaagtactattcagtgattttactgt 299
Query: 301 tacaaagcaatacatttgatattggatatccaatgtgggaggtggttcatttttcctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tacaaagcaatacatttgatattggatatccaatgtgggaggtggttcatttttcctgtt 239
Query: 361 ctcaacatttcttacttgcatatagttttttgtccaaagaactatatatagctttgagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctcaacatttcttacttgcatatagttttttgtccaaagaactatatatagctttgagct 179
Query: 421 ttcccactttcatgtttcaagtctatttttccttgttcaggtcttgtttaggcagacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ttcccactttcatgtttcaagtctatttttccttgttcaggtcttgtttaggcagacata 119
Query: 481 ttggtgaaacatcatggatatatggcctgacatttctagag 521
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 118 ttggtgaaacatcatagatatatggcctgacatttctagag 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_b07.g1 MSMg01no076_b07.g1 CHROMAT_FILE:
MSMg01no076_b07.g1 PHD_FILE: MSMg01no076_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:56 2005
(338 letters)
>mm_chr4_21629134_21629868
Length = 735
Score = 526 bits (272), Expect = e-154
Identities = 324/350 (92%), Gaps = 16/350 (4%)
Strand = Plus / Plus
Query: 1 actatgtagaccatctggcctagaactcatggaaatctgcctgcctctgcctcctagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 actatgtagaccatctggcctagaactcatggaaatctgcctgcctctgcctcctagtgt 247
Query: 61 tggtattaaaggcacttaacaccatgaaccagctccttcaagtaacaaggttctatgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tggtattaaaggcacttaacaccatgaaccagctccttcaagtaacaaggttctatgaag 307
Query: 121 cagaataaagtaag---g----------tcaatcctgaggaaggtgggttttatgtggaa 167
||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 308 cagaataaagtaataaagaataaacatttcaatcctgaggaaggtgggttttatgtggaa 367
Query: 168 tgattttaaagggtctctctgacaagtagtattcgactagaaagaagtaaggcagacagt 227
|| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 368 tggttttaaagggtctctctgac---tagtattcgactagaaagaagtaagggagacagt 424
Query: 228 catgtaaaatgcctgggtttgtataaatgaattgtgctggatagttttatgacaagctag 287
||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 425 catataaaatatctgggtttgtataaatggattgtgctggatagttttatgacaagctag 484
Query: 288 ttatctgagaagagagaacatcaaccaagataacatctctctaagactgg 337
| ||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 485 tcatctgagaagagagaacatcaaccaagataatacctctctaagactgg 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 735
Length adjustment: 9
Effective length of query: 329
Effective length of database: 726
Effective search space: 238854
Effective search space used: 238854
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
