CTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGGAGGAATCCGCGGAA
TTCAGCCTTTACCACATAACAAAGGAAGTGGTGAGACTAAAATAAAGCTG
ACGAGACTGCTCAATCTTACATAGTAACTTCACTCATAAAAAAATATTCC
CTGGCTTCACTTTCAATTAAAATCGCAGTTTGACTCTCTCATTTCATTCC
TGTAGCTGATACTTCCTTAGAGACAGACATCTACTAGCCCCTAGGCTTAT
CTGCTATTCCTCTCAATAAATTATCTCCTTTCAGATGACACTTAGCAAAT
ATAAATATCGTTTGTTTTGCATTTTCAAATACCACTGAGCTGTATTCAGT
TCATCAAGAAATATTTAGAATATCAATGGGAACTAAATTGCCTTCCTCTT
TGGCTGTAGTTGGCATAACTAAAATAAACATCAATGAAATAAAAGTTAAA
AGGCCAGGTTGTTAGCTTGACATTCATTAACTGGGTCTGTACAAAGTTTT
CTGATATTTGTATTGTTTTCTGTGAAATGAAGATTTTATGAGTTGATATC
CAAATTATATCTTCAAGTTTAAAATACTATTTTGACTGTTGTGCCAAAAC
ATGAGGTATTAAAATTTTATTATTTAATTATATTATTATTTTTTATTATC
AAGAATCAAATAAATAGCATACCTTTGTGCTCTAAGTCTGTATATAT

TTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAACTGCATTCAACTGAACTGTTCCAA
ACTGTACTGAACTGCATTCTGCTGAACTCGGTACTGCCTGAATACAACTG
AACTGAAATCACTGGACTGCCTTCCTCTTCTGACTCACTCTGCCAAAATC
TTTCTTGGAGTCATCATCTTTCCTCCCCCTCAATTAGATGTCACTTCCAA
ACATGACTGTTACATTTTACATGCTACCTTCATTATTTAAGATTAAGTTT
TTGGTGCTATAGGCTTGTATGTATTCCAGCCAGAGGGATTAAAGATATGT
CATTCCAGCTAGATCATACAGACTTAGAAGGTCTTTGGATGTGATCCCTT
GACAGAGCAGCCATGTTGCTAGATTAAAATTGTGCTACAAAGAGGGATTG
GAGGGGTTGGAGGAAGTAGATATGGCAGCGATTCTTCCCACTTTTTCCCT
TTCCCCCCTTTCTTTCCCTTTTTCTTACCCCCACCCTTTCACTTTCTTCT
TTTTCCCCCCCTTCCCCTTCTTCCACACACTTCCTTTCCCTTTCTCTCTC
CCTTTCCCCTTCATTTTCTTCTTCTTCATACCCACCCTCTTCATTTTCTC
CACTTATCTTTCTTTTTTTCCTCCTCCCTCTCTTTACTCCCCTCTTCTCC
CTTCC

Query= MSMg01no076_h10.b1 MSMg01no076_h10.b1 CHROMAT_FILE:
MSMg01no076_h10.b1 PHD_FILE: MSMg01no076_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:26 2005
         (629 letters)



>mm_chr4_51827055_51828084
          Length = 1030

 Score = 1141 bits (590), Expect = 0.0
 Identities = 620/630 (98%), Gaps = 1/630 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaaaggaagtggtgagactaaaataaagctgacgagactgctcaatcttacatagtaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaaggaagtggtgagactaaaataaagctgacgagactgctcaatcttacatagtaac 260

                                                                       
Query: 61  ttcactcataaaaaaatattccctggcttcactttcaattaaaatcgcagtttgactctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 ttcactcataaaaaaatattccctggcttcactttcaattaaaatcgcagtttgactctt 320

                                                                       
Query: 121 tcatttcattcctgtagctgatacttccttagagacagacatctactagcccctaggctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttcattcctgtagctgatacttccttagagacagacatctactagcccctaggctt 380

                                                                       
Query: 181 atctgctattcctctcaataaattatctcctttcagatgacacttagcaaatataaatat 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atctgctattcctctcaataaattatctcctttcagatgacgcttagcaaatataaatat 440

                                                                       
Query: 241 cgtttgttttgcattttcaaataccactgagctgtattcagttcatcaagaaatatttag 300
           ||||||   ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtttgaaatgcattttcaaatactactgagctgtattcagttcatcaagaaatatttag 500

                                                                       
Query: 301 aatatcaatgggaactaaattgccttcctctttggctgtagttggcataactaaaataaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatatcaatgggaactaaattgccttcctctttggctgtagttggcataactaaaataaa 560

                                                                       
Query: 361 catcaatgaaataaaagttaaaaggccaggttgttagcttgacattcattaactgggtct 420
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 catcaatgaaataaaagttaaaaggcgaggttgttagcttgacattcattaactgggtct 620

                                                                       
Query: 421 gtacaaagttttctgatatttgtattgttttctgtgaaatgaagatttt-atgagttgat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 621 gtacaaagttttctgatatttgtattgttttctgtgaaatgaagatttttattagttgat 680

                                                                       
Query: 480 atccaaattatatcttcaagtttaaaatactattttgactgttgtgccaaaacatgaggt 539
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atccaaattacatcttcaagtttaaaatactattttgactgttgtgccaaaacatgaggt 740

                                                                       
Query: 540 attaaaattttattatttaattatattattattttttattatcaagaatcaaataaatag 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attaaaattttattatttaattatattattattttttattatcaagaatcaaataaatag 800

                                         
Query: 600 catacctttgtgctctaagtctgtatatat 629
           ||||||||||||||||||||||||||||||
Sbjct: 801 catacctttgtgctctaagtctgtatatat 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1030
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1020
Effective search space:   631380
Effective search space used:   631380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)