CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATC
ACTCCCTGTGTGCAGCTCTCCTTAATAGTGTCTCATGTCTCTGGCTATGT
AACATCTTGGGAGTCTCCATTGCAACTCAGGCTTCACTTCCACAGCTTCA
TGGAGTGGCATCTCATGGCTTCTAGGCTGGGACTTCTCTGTCAGGCATTG
CTTATTAGCCTTGTGGCTCTTTGAAACTGGTGGAAGATGTCACTACTCAT
TTGCTTATGTATCTTTGCCATGTGGATGACACTGCCAGTTCATCTGCCAG
CTTGGGGTGGTCCCTCACTCCCTTGAATCACCTTAACAGCAGCTTTTGAT
TGCTTCCTCCCTTGGGCCTTCCTTATTACTTAGCTCCTTTTTTGGTCTGC
ATTGTAGAATGAAGATCTTTTCCCCATTCTGTAAGCTGTTGTTTTGTTCT
TTTTCTCTTTTTCAAAATGATATTTTCTTCATTTACATTTCAATGCTATC
CCAAAAGTCCCCTATACCCTCCGCCCTGCCCTGCTCCCCAACCCACCCAC
TTCCTAGCCCTGGCATTCCCCTGTACTGGGGCATATCATATAATCTTCAC
AAGACTAAAGGGCCTTTCTTCTCATCGATGGCCAACTAGGCCATCCTCTG
CTACATATGCAACTACAGACACAAGTTCTGGGAT

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCCTTTTACCCAGTTCACTGGTATTAT
TGAGCATAATTTTGTATTCTAATAGAAAACTTCAATGAACCTCAGTGTTT
ATACATACTCATCTATTTGCCATTGTTAATTAGCTTTCAATTGATTTGAT
TTATTTTGTTTTACACTATATTAAAGTTAACAGTATATTTAAGATACATC
GATGAGAGAAAATGAAGGGGCAAAAATATCTTCCCAACTTCAGTCTAGCA
ACTCAGCATTTAGTGAATGTTTGGTAATAGTTTTTTATCAGGGAAGGAGA
GATAAACAAGTGGATAGAATAACTAGGATAGTAAAGGGAGGAATGACAAA
GAAATGACTAGAATCTGAAGACAAGTATGTAAATAGCTTGATTTTAAAAA
GCACATACCAACAAACTCACTCTCAGATCCCTGCAAAGTCTAGGACAGTA
GCTTATAGAAATGGTTTATGAATGCAAGTAGACTACCAAGACCATGAACA
CTCCAAGCATGGACAATGAGGACTCCAGAAAGGCAAACAAGGATATGCTT
TACGGAAGTGTTTGCAATGAGATTAAGAAGCATAGGCTAAGATGAATATG
TTCATCTGTCACTGGAAGAGAGTGGTCTCAAACAGTTAACT

Query= MSMg01no079_k06.g1 MSMg01no079_k06.g1 CHROMAT_FILE:
MSMg01no079_k06.g1 PHD_FILE: MSMg01no079_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:19 2005
         (618 letters)



>mm_chr4_109545295_109546312
          Length = 1018

 Score = 1102 bits (570), Expect = 0.0
 Identities = 598/618 (96%), Gaps = 17/618 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccttttacccagttcactggtattattgagcataattttgtattctaatagaaaacttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tccttttacccagttcactggtattattgagcataattttgtattctaatagaaaacttc 641

                                                                       
Query: 61  aatgaacctcagtgtttatacatactcatctatttgccattgttaattagctttcaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aatgaacctcagtgtttatacatactcatctatttgccattgttaattagctttcaattg 581

                                                                       
Query: 121 atttgatttattttgttttacactatattaaagttaacagtatatttaagatacatcgat 180
           |||||||||||||||||||||||                 ||||||||||||||||||||
Sbjct: 580 atttgatttattttgttttacac-----------------tatatttaagatacatcgat 538

                                                                       
Query: 181 gagagaaaatgaaggggcaaaaatatcttcccaacttcagtctagcaactcagcatttag 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gagagaaaatgaaggggaaaaaatatcttcccaacttcagtctagcaactcagcatttag 478

                                                                       
Query: 241 tgaatgtttggtaatagttttttatcagggaaggagagataaacaagtggatagaataac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgaatgtttggtaatagttttttatcagggaaggagagataaacaagtggatagaataac 418

                                                                       
Query: 301 taggatagtaaagggaggaatgacaaagaaatgactagaatctgaagacaagtatgtaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 taggatagtaaagggaggaatgacaaagaaatgactagaatctgaagacaagtatgtaaa 358

                                                                       
Query: 361 tagcttgattttaaaaagcacataccaacaaactcactctcagatccctgcaaagtctag 420
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 357 tagcttgattttaaaaagcacatatcaacaaactcactctcagatccctgcaaagtctag 298

                                                                       
Query: 421 gacagtagcttatagaaatggtttatgaatgcaagtagactaccaagaccatgaacactc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gacagtagcttatagaaatggtttatgaatgcaagtagactaccaagaccatgaacactc 238

                                                                       
Query: 481 caagcatggacaatgaggactccagaaaggcaaacaaggatatgctttacggaagtgttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 237 caagcatggacaatgaggactccagaaaggcaaacaaggatatgctttaaggaagtgttt 178

                                                                       
Query: 541 gcaatgagattaagaagcataggctaagatgaatatgttcatctgtcactggaagagagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gcaatgagattaagaagcataggctaagatgaatatgttcatctgtcactggaagagagt 118

                             
Query: 601 ggtctcaaacagttaact 618
           ||||||||||||||||||
Sbjct: 117 ggtctcaaacagttaact 100


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space:   612864
Effective search space used:   612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)