ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCACCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCT
GGAGTCCACCTTCTTGAGTTCTTTTTTTTTTTTTAAGACTTTTGCAAAGT
CTACCTTTTTCCTTTTTTTTCCATTTTTATTAGGTATTTAGCTCATTTAC
ATTTCCAATGCTATACCCCCATACCCACCCACCCCCACTCCCCTACCCAT
CCACCCCCCCTTTTTGGCCCTGGCATTCCCCTGTACTGGGCCCCACCCAG
ATTGCGTGCCCAATGTTCTTTTCCTTCCCGTGACGCCCTACTACGCCTTC
TCTTGATTCCTATCGCTACTCGAGCCACGATTTCTGGTGTACTGCTCAGT
TCTTACCCGCCCCCCCTCTTCCCCATCTGTTCGCCCTTTTTTTCACCTCG
CGCCTACTTCCCCCATTCCCCTCATTTTTTCTCCCCCCCCCCCCTCCTAT
CCATCCGCTTAGTCCGCATTATTTTCCCTGTACTCAGCCCGCCTACCGCC
CCCCCCACCCCCCTTTACTACCCCCTATTTTTTTTTATTTATCCCTATCT
TTCCCTATCCTTGCCCTTATTTTTTCCCCCTTTTATTTTTTTTTCCCGTT
CCCCCTCTCCCCCCCCCCTCTTTTTTCTCCCCCCCTCCCTCTCCCGCCGC
TTCCCCTTATTTTTTTTCTTTCCCCCCCCCCCTT

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATATATTGTTTTATGCTAAGGAATCCTAAAA
TGGAGAGGCAGCTCTATCAGCAACTGAGGAATCTTCGAGGTAGTACAGAT
TTTTTTCCATTTGAATTATAAATATCTGGATGTCAATTATCCAGAGGAGC
AGCAATTCTCAAAAATTCTCAACATTTCTTAGGCTATTCTCATTTAAATT
TTTTAGATTGTTTCTAAATGATCATTCTTGTTAGGAATGGTAAACTTACT
ATATTTTATTGCATTTAAACTGAGTATCACTTATCTAGGCTGTTCCAATT
TCCCATTGATTGTGAAAACAATAGCAATGAAAATGGACCAGAAAGTATTT
CTGCAGTATGTCAAAGACAACTTTGCAAATATGCCTTGGAGTGGCGCTTT
TAAGGACCCTCCACATTGACTTCCATCAGAGCTGTACCAGTTGAATTCAT
GCCCACAGTTGGAAAAGTGTTTCCTTTGCCTGGTGTCAATGTGAGCATGA
GTTGTCCTTTTATTTTATGTTTTTATTATAGACATTCTGACTGGCTAATA
TGAAGTTTCAAAGTAGTTTTAACTTGCATTTCTCTTTGGCTTAAAATGTG
GGACATTTAAAAATATTTTCAGCCATTTGTAATTTTCCTTTTGAA

Query= MSMg01no080_a12.g1 MSMg01no080_a12.g1 CHROMAT_FILE:
MSMg01no080_a12.g1 PHD_FILE: MSMg01no080_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:49 2005
         (581 letters)



>mm_chr4_36869796_36870775
          Length = 980

 Score =  857 bits (443), Expect = 0.0
 Identities = 458/463 (98%), Gaps = 1/463 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatattgttttatgctaaggaatcctaaaatggagaggcagctctatcagcaactgagg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atatattgttttatgccaaggaatcctaaaatggagaggcagctctatcagcaactgagg 403

                                                                       
Query: 61  aatcttcgaggtagtacagatttttttccatttgaattataaatatctggatgtcaatta 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 402 aatcttcgaggtagtacagatttttttccatttgaattataaatatctgggtgtcaatta 343

                                                                       
Query: 121 tccagaggagcagcaattctcaaaaattctcaacatttcttaggctattctcatttaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 342 tccagaggagcagcaattctcaaaaattctcaacatttcttaggctattctcatttaaa- 284

                                                                       
Query: 181 tttttagattgtttctaaatgatcattcttgttaggaatggtaaacttactatattttat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tttttagattgtttctaaatgatcattcttgttaggaatggtaaacttactatattttat 224

                                                                       
Query: 241 tgcatttaaactgagtatcacttatctaggctgttccaatttcccattgattgtgaaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tgcatttaaactgagtatcacttatctaggctgttccaatttcccattgattgtgaaaac 164

                                                                       
Query: 301 aatagcaatgaaaatggaccagaaagtatttctgcagtatgtcaaagacaactttgcaaa 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aatagcaatgaaaatagaccagaaagtatttctgcagtatgtcaaagacaactttgcaaa 104

                                                                       
Query: 361 tatgccttggagtggcgcttttaaggaccctccacattgacttccatcagagctgtacca 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 103 tatgccttggagtggcgcttttaaggaccctccatattgacttccatcagagctgtacca 44

                                                      
Query: 421 gttgaattcatgcccacagttggaaaagtgtttcctttgcctg 463
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  gttgaattcatgcccacagttggaaaagtgtttcctttgcctg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space:   553870
Effective search space used:   553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)