Query= MSMg01no087_c03.b1 MSMg01no087_c03.b1 CHROMAT_FILE:
MSMg01no087_c03.b1 PHD_FILE: MSMg01no087_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:08 2005
(251 letters)
>mm_chr4_35968076_35968726
Length = 651
Score = 485 bits (251), Expect = e-142
Identities = 251/251 (100%)
Strand = Plus / Plus
Query: 1 tccaagacttttgtctggataagtttctgactccatgtttctgcccagtgtgtattcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaagacttttgtctggataagtttctgactccatgtttctgcccagtgtgtattcctg 260
Query: 61 ctctgacctccctctgtgatgtagtatgatgctgaactctaagttaaataaacatttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctgacctccctctgtgatgtagtatgatgctgaactctaagttaaataaacatttttc 320
Query: 121 tccctatgtttttgtatatagcaaaaggaatcctaagacagatgggtgaaagaatggata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccctatgtttttgtatatagcaaaaggaatcctaagacagatgggtgaaagaatggata 380
Query: 181 aggggagaaagaaaagagagagttacaggtgataaaaagagaaaccattatttcaggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggggagaaagaaaagagagagttacaggtgataaaaagagaaaccattatttcaggtca 440
Query: 241 aaaggagctta 251
|||||||||||
Sbjct: 441 aaaggagctta 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_c03.g1 MSMg01no087_c03.g1 CHROMAT_FILE:
MSMg01no087_c03.g1 PHD_FILE: MSMg01no087_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:08 2005
(306 letters)
>mm_chr4_36117990_36118695
Length = 706
Score = 574 bits (297), Expect = e-168
Identities = 303/305 (99%), Gaps = 2/305 (0%)
Strand = Plus / Minus
Query: 1 ttctaagtaatgtcactatggcctcatcatcagaatgttggaaaggacagactcttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ttctaagtaatgtcactatggcctcatcatcagaatgttggaaaggacagactcttggaa 257
Query: 61 acagaagccatctcctagacaatacttgcatgctagccttacaatttgaaaactttgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 acagaagccatctcctagacaatacttgcatgctagccttacaatttgaaaactttgaga 197
Query: 121 ctgaagagaagcctcggggtcagagcacttgctgcccttgcagaagccccaagttcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ctgaagagaagcctcggggtcagagcacttgctgcccttgcagaagccccaagttcagat 137
Query: 181 ttgagcactcacagctacctttaactccagctccaggaaatctaattttctgttgtagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ttgagcactcacagctacctttaactccagctccaggaaatctaattttctgttgtagtc 77
Query: 241 tgtggagagagagaaagagagagagagagagg-gagagagagagagagagggagagagag 299
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 76 tgtggagagagagaaagagagagagagag-ggagagagagagagagagagggagagagag 18
Query: 300 agaga 304
|||||
Sbjct: 17 agaga 13
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
