Query= MSMg01no087_g24.b1 MSMg01no087_g24.b1 CHROMAT_FILE:
MSMg01no087_g24.b1 PHD_FILE: MSMg01no087_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:33 2005
(247 letters)
>mm_chr4_131567966_131568611
Length = 646
Score = 447 bits (231), Expect = e-130
Identities = 243/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 1 gtttctttctcttgacatctgtattcatccttaacttaaaagctacctttttcaggagcg 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 446 gtttctttctcttgacatctgtattcatccttaatttaaaagctacctttttcaggagcg 387
Query: 61 tttcctggttgctctagctgaatgctctttgagtgctctcttctattactttgtagtcct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 386 tttcctggttgctctagctgaatgctctttgagtgctctcttctattacttt-tagtcct 328
Query: 121 gatttcacttagaacattttctcagatgaaatagtacgttttgccttttagttttagcta 180
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 327 gatttcacttagaacattttctcagatgcaatagtaggttttgccttttagttttagcta 268
Query: 181 tgtatttcttctctacttaagatttgtgtattagagacccaagcaaaaaccttacacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgtatttcttctctacttaagatttgtgtattagagacccaagcaaaaaccttacacctg 208
Query: 241 attagca 247
|||||||
Sbjct: 207 attagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_g24.g1 MSMg01no087_g24.g1 CHROMAT_FILE:
MSMg01no087_g24.g1 PHD_FILE: MSMg01no087_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:34 2005
(296 letters)
>mm_chr4_131432846_131433541
Length = 696
Score = 572 bits (296), Expect = e-168
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1 tgggagtttgaaagagacaaaactactagtacctttcagctttatggtagcttttgttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggagtttgaaagagacaaaactactagtacctttcagctttatggtagcttttgttgg 260
Query: 61 ctttgattacatgtgaattgtatcaattttcttttttattaataaatcactttgttgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgattacatgtgaattgtatcaattttcttttttattaataaatcactttgttgtga 320
Query: 121 tatgtggaacgtttttgtttgtttgtttttatgtacaatttctctcttgccacaaacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtggaacgtttttgtttgtttgtttttatgtacaatttctctcttgccacaaacatc 380
Query: 181 ttgtaagtttcagtcacagatctttccattttttgagtaaagcttactccatccttaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtaagtttcagtcacagatctttccattttttgagtaaagcttactccatccttaaat 440
Query: 241 ggtttacctgtttaataacaagagtaagttacaaattattgaggttttctttcttt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtttacctgtttaataacaagagtaagttacaaattattgaggttttctttcttt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
