CAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATTGTATCCACTTTTATTCTCAACTTGAATTGACTATATTACTTGG
CCCAAACTCCTCAGTGCATTTCTGAGACCTCAGTACTAAGCTCTGGTCCA
TGAACCTGACAGTTTGGCTTGACCATTCCATCTCTTGTTCCTTTCAGAGG
CCACTTCAGCAGTCAGATCCCTGGCCCTTAGCCCTCTGTTTGTGTCTGAC
AGGAACAGCTTGCTTTGCCTCCTCTTAAGTAGAATGCAGTTTTAACTCTG
GCTTTTCCCATTTCCAATATTTCTAGAGTATTAGTCAGACTTCTATACAA
TTCTTTATCATTAAGACAGGATTACATCTCAACTAGTTAAAAGCTAGTCA
GACTTCTATAAAATTCTTTATGGTTAAGATAGGATTGCATCTCAACCAGT
TAAAATCTAACCCTACTGAAAGAGATAAATTATGACAAAAATTTCCCTCC
TGTAATTGTGCTTGTGGCTTCTAAACTGATATCTGACCAGCCCCCTCAAA
GAAGTAATTATTCAGCTCTCTCCACTTTAGAAACGGGAAAATTAGGGATC
AGAGCTGAGAAACCATCTTTTTCATATCAAGCCACAAGTGAGTGACAACA
CCGAGGAGGGAATACCGGTCTTTTGTAATCTAACTTTCATATCTTAAGTA
CC

AACAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGAATATCAAGACAGGGAGATCTCT
GAGTTCAAGGTCATCTGGAACTAAAGGCTGGGAGGCATACACCTTTAATC
TGGGCTACACCTTCTGCTGGAGACCTACCTAAGGACATTGTAAGAAGGAA
GATTCTCTCTCCTTCACCTGTTTGCCTTGTGGGACTGAGCAACTGCTAGA
TCCTTGGACTTCCATTCACAGCTGCTGCTGACCATTGTTGGGAGTTGGAC
TACAGACTGTACATCATCAACAATTCCCTTACTATATAGAGACTACCCAT
AATTTCTGTGACTCTCCACAACCCTGACTAATACAGTTATCAAGTGGAGG
CCAGAATGCTAACATTTGTTTGGTAGTCAAGGGAACACGACAAGTTCAGG
TGAAACTACAGAAAACAAGAAGTGAACAGGACTAGTTCCGAGGTATGGCC
TCCAGATTTGGAAAAATCTAAAAGAGACAAAGTTTCAAAATTTAGAATTG
AGATGATAAATTGCTCCTGTTGCCTCAGAAATATTTTCAGAAAGAACTTG
AGTGAGCCTAGAGTAATAAGGAAATGTGCTAGTCAAGAGCCTATGAAGAT
AATGCACACAAAAATTAATTGAACAAAATAGAAAAGGCACTCAATGTCTC
AA

Query= MSMg01no087_p11.b1 MSMg01no087_p11.b1 CHROMAT_FILE:
MSMg01no087_p11.b1 PHD_FILE: MSMg01no087_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:16 2005
         (658 letters)



>mm_chr4_110599702_110600759
          Length = 1058

 Score = 1241 bits (642), Expect = 0.0
 Identities = 651/654 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattgtatccacttttattctcaacttgaattgactatattacttggcccaaact 64
           ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcattgtattcacttttattctcaacttgaattaactatattacttggcccaaact 264

                                                                       
Query: 65  cctcagtgcatttctgagacctcagtactaagctctggtccatgaacctgacagtttggc 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 265 cctcagtgcatttctgagacctcagtactaagctctggtccatgaacctgacagcttggc 324

                                                                       
Query: 125 ttgaccattccatctcttgttcctttcagaggccacttcagcagtcagatccctggccct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgaccattccatctcttgttcctttcagaggccacttcagcagtcagatccctggccct 384

                                                                       
Query: 185 tagccctctgtttgtgtctgacaggaacagcttgctttgcctcctcttaagtagaatgca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagccctctgtttgtgtctgacaggaacagcttgctttgcctcctcttaagtagaatgca 444

                                                                       
Query: 245 gttttaactctggcttttcccatttccaatatttctagagtattagtcagacttctatac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttttaactctggcttttcccatttccaatatttctagagtattagtcagacttctatac 504

                                                                       
Query: 305 aattctttatcattaagacaggattacatctcaactagttaaaagctagtcagacttcta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aattctttatcattaagacaggattacatctcaactagttaaaagctagtcagacttcta 564

                                                                       
Query: 365 taaaattctttatggttaagataggattgcatctcaaccagttaaaatctaaccctactg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaaattctttatggttaagataggattgcatctcaaccagttaaaatctaaccctactg 624

                                                                       
Query: 425 aaagagataaattatgacaaaaatttccctcctgtaattgtgcttgtggcttctaaactg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagagataaattatgacaaaaatttccctcctgtaattgtgcttgtggcttctaaactg 684

                                                                       
Query: 485 atatctgaccagccccctcaaagaagtaattattcagctctctccactttagaaacggga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatctgaccagccccctcaaagaagtaattattcagctctctccactttagaaacggga 744

                                                                       
Query: 545 aaattagggatcagagctgagaaaccatctttttcatatcaagccacaagtgagtgacaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaattagggatcagagctgagaaaccatctttttcatatcaagccacaagtgagtgacaa 804

                                                                 
Query: 605 caccgaggagggaataccggtcttttgtaatctaactttcatatcttaagtacc 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 caccgaggagggaataccggtcttttgtaatctaactttcatatcttaagtacc 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)