Query= MSMg01no088_i20.b1 MSMg01no088_i20.b1 CHROMAT_FILE:
MSMg01no088_i20.b1 PHD_FILE: MSMg01no088_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:04 2005
(440 letters)
>mm_chr4_9775547_9776386
Length = 840
Score = 777 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 1 caaatgtgctagtgctgctgggttgattgctccatgcagaaagcaacacaatgtaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caaatgtgctagtgctgctgggttgattgctccatgcagaaagcaacacaatgtaacagg 543
Query: 61 caaacttcaatagcaggaaactatgaagcactagatcgccctcctctctccaaagcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caaacttcaatagcaggaaactatgaagcactagatcgccctcctctctccaaagcctgc 483
Query: 121 ctgtccctagcatacttctgcctccttgtaatctctgagctgaagataaagagcagactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgtccctagcatacttctgcctccttgtaatctctgagctgaagataaagagcagactc 423
Query: 181 tccctgactggattctaagggtgcccagctccaaaggatgctttcctctcttctttggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tccctgactggattctaagggtgcccagctccaaaggatgctttcctctcttctttggtg 363
Query: 241 ttatctgttctttgctgtcttctttctgtaagcaggtttgtatcaacaacacaacaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttatctgttctttgctgtcttctttctgtaagcaggtttgtatcaacaacacaacaatag 303
Query: 301 caactattctctgggaaaactaacctacagaagtaaccttaaactcaatttgttcctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 caactattctctgggaaaactaacctacagaagtaaccttaaactcaatttgttcctttc 243
Query: 361 atctttgatgccttgaaagttttgcatatatatatatatata 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atctttgatgccttgaaagttttgcatatatatatatatata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_i20.g1 MSMg01no088_i20.g1 CHROMAT_FILE:
MSMg01no088_i20.g1 PHD_FILE: MSMg01no088_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:04 2005
(100 letters)
>mm_chr4_9681668_9682167
Length = 500
Score = 178 bits (92), Expect = 8e-50
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 1 tgatgaatggcttgtgtgcacagtgccactttgttggttgacccagaaggtttccttcca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgatgaatggcttgtgtgcacagtgccactttgttggttgacccagagggtttccttcca 260
Query: 61 ttttcatagaagtctatactttacaatgaagatctaagtt 100
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ttttcatggaagtctatactttacaatgaagatctaagtt 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 100
Length of database: 500
Length adjustment: 8
Effective length of query: 92
Effective length of database: 492
Effective search space: 45264
Effective search space used: 45264
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
