Query= MSMg01no088_j02.b1 MSMg01no088_j02.b1 CHROMAT_FILE:
MSMg01no088_j02.b1 PHD_FILE: MSMg01no088_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:05 2005
(448 letters)
>mm_chr4_101558516_101559363
Length = 848
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Plus
Query: 5 gaattcacaggtcatttggtgctacaggtttgagttagagtgatctagggacagcatagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaggtcatttggtgctacaggtttgagttagagtgatctagggacagcatagt 264
Query: 65 ggtctgagctccttgatactgtgccagcacatgtttgaatctagaaaaggaaaaaaaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtctgagctccttgatactgtgccagcacatgtttgaatctagaaaaggaaaaaaaata 324
Query: 125 caaaattacatcaggaaaaaagtcatctccagccaagttcagagcaggggctgaattata 184
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 caaaattacatcaggaaaaaagtcatctccagcctagttcagagcaggggctgaattata 384
Query: 185 gaatctagcctgtgagcacccacaggataagatggtacttattgcctgtgagcacccaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatctagcctgtgagcacccacaggataagatggtacttattgcctgtgagcacccaca 444
Query: 245 ggataaggtggtacttattgccagtgagcttggtgtctgtctcccactttggaaacttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggataaggtggtacttattgccagtgagcttggtgtctgtctcccactttggaaacttta 504
Query: 305 tttcattattgctacacttaagtcatccggtccttgtgaacattgttactaaatcaagtt 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttcgttattgctacacttaagtcatccggtccttgtgaacattgttactaaatcaagtt 564
Query: 365 ttgtaaaatttagggtgaatacatggtgtttgataacccaaacgttacagaaagagaacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtaaaatttagggtgaatacatggtgtttgataacccaaacgttacagaaagagaacc 624
Query: 425 aataatttgagctatggctttaat 448
||||||||||||||||||||||||
Sbjct: 625 aataatttgagctatggctttaat 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_j02.g1 MSMg01no088_j02.g1 CHROMAT_FILE:
MSMg01no088_j02.g1 PHD_FILE: MSMg01no088_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:05 2005
(298 letters)
>mm_chr4_101724258_101724954
Length = 697
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 attgttactgtggcaactgggggagcagcacaggtacataggatgaatgagcacctgaaa 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 attgttactgtggcaactgggggagcagcacaggtacataggatgagtgagcacctgaaa 431
Query: 61 gccatcactggggccagaagaatgtgcgccataaaacaacattttagccaccctgaggag 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gccatcgctggggccagaagaatgtgcgccataaaacaacattttagccaccctgaggag 371
Query: 121 tggtggaagccatggagcccactgaaatgttattttgactactttatctcttcgtctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tggtggaagccatggagcccactgaaatgttattttgactactttatctcttcgtctgca 311
Query: 181 gatttttcctctgatcatgtgttttctcctcttttaattgaaagtttagttgctttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gatttttcctctgatcatgtgttttctcctcttttaattgaaagtttagttgctttgaaa 251
Query: 241 tgactgtgtgtgtgtgttaaattaacatttttttttttggttttttttttt 291
||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 250 tgactgtgtgtgtgtgttaaattaacatttttttttt-ggttttttttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 697
Length adjustment: 9
Effective length of query: 289
Effective length of database: 688
Effective search space: 198832
Effective search space used: 198832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
