Query= MSMg01no088_p23.b1 MSMg01no088_p23.b1 CHROMAT_FILE:
MSMg01no088_p23.b1 PHD_FILE: MSMg01no088_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:39 2005
(482 letters)
>mm_chr4_62536685_62537566
Length = 882
Score = 779 bits (403), Expect = 0.0
Identities = 451/479 (94%), Gaps = 21/479 (4%)
Strand = Plus / Plus
Query: 5 ggaattcctggtatct-caactctgagttaagtaaacatatttctttataagagaaaatt 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ggaattcctggtatctaaaactctgagttaagtaaacatatttctttataagagaaaatt 283
Query: 64 cctagcttcaggtattttgctacagcaacaacaacaacaaaaaaaaaaccccaaaacctc 123
||||||||||||||||||||||||||||| |||| | ||||
Sbjct: 284 cctagcttcaggtattttgctacagcaac--------------gaaaatc------cctc 323
Query: 124 actaagacgcttgatcaaatcatatagtgagaagagaaggcttgtggggagggagggaat 183
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actaagacacttggtcaaatcatatagtgagaagagaaggcttgtggggagggagggaat 383
Query: 184 tgccgccacagtgtagaaaaacaagtcatttcttgcttaagaatcagtatttgggggctg 243
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 tgctgccacagtgtagaaaaacaagtcatttcttgcttaacaatcagtatttgggggctg 443
Query: 244 gggagatgtctcagttactaacgggactgccacacataaggatctgagtttggatcgcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggagatgtctcagttactaacgggactgccacacataaggatctgagtttggatcgcta 503
Query: 304 gtgctcaggtgcatgtctaggagcctagagcagtatcgagaagaaacaggcagattccct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgctcaggtgcatgtctaggagcctagagcagtatcgagaagaaacaggcagattccct 563
Query: 364 agagctctggccggtcgaaagggttcagtgagagaccctgtcacaaaggataaggtgagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agagctctggccggtcgaaagggttcagtgagagaccctgtcacaaaggataaggtgagg 623
Query: 424 ctgggagatagctcagtaggtaaaagcgcttgcgattgcatccaagggttctgtctctg 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctgggagatagctcagtaggtaaaagcgcttgcgattgcatccaagggttctgtctctg 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_p23.g1 MSMg01no088_p23.g1 CHROMAT_FILE:
MSMg01no088_p23.g1 PHD_FILE: MSMg01no088_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:39 2005
(356 letters)
>mm_chr4_62631037_62631792
Length = 756
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%)
Strand = Plus / Minus
Query: 1 tatttctgttagaccacattgctctgacacgtctaaaggatgagacaacccagggactac 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 556 tatttctgttagaccacattgctctgacacgtctaaaggatgagacaattcagggactac 497
Query: 61 agaggaaatacgttcacacaaaaacataaacttccacagtgaccagaacataaatatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agaggaaatacgttcacacaaaaacataaacttccacagtgaccagaacataaatatgtc 437
Query: 121 atgggctaaccccagacagacttctctggcaaactcacgagaaaacagaaaatgaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 436 atgggctaaccccagacagacttctctggcaaactcacgagaaaacagaaaatcaaagaa 377
Query: 181 agcatgacaggcgctgggtctactgagacggagacccacactaccctcacgtctccagca 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 376 agcatgacaggcgctgggtctaccgagacggagacccacactaccctcacgtctccagca 317
Query: 241 ctggggtacgacctcctacccatcatgcgtcccgtcagagccagcaagcagggacggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctggggtacgacctcctacccatcatgcgtcccgtcagagccagcaagcagggacggtgc 257
Query: 301 ctcccgatgtacacagccaagaattcccaggtggctgaaaagcgcctcagactggg 356
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 256 ctcccgatgtacacagccaagaattcccaggtggctgaaaagcggttcagactggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
