Query= MSMg01no090_a24.b1 MSMg01no090_a24.b1 CHROMAT_FILE:
MSMg01no090_a24.b1 PHD_FILE: MSMg01no090_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:06 2005
(385 letters)
>mm_chr4_100496120_100496908
Length = 789
Score = 663 bits (343), Expect = 0.0
Identities = 376/393 (95%), Gaps = 12/393 (3%)
Strand = Plus / Plus
Query: 1 taattgaactatttctacttatcttaaccagactggatgctctacccc-----taatttc 55
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 taattgaactatttctacttatcttaaccagactggatgctcta----aaaagtaatttc 256
Query: 56 tttagggtaccttggaaaatagaatgggggg---cggggctgggaaacttccaggctttc 112
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 257 tttagggtaccttggaaaatagaatgggggggggcggggctgggaaacttccaggctttc 316
Query: 113 gatcataatgaaaacaggaaataccgtaaaccctatcactttgggtgaaagattaaattt 172
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 317 gatcataatgaaaacaggaaataccataaaccctatcactttgggtgaaagattaaattt 376
Query: 173 aacaatctctcaaccaagacatgcttccagcctgattggactgacatttatataggacct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aacaatctctcaaccaagacatgcttccagcctgattggactgacatttatataggacct 436
Query: 233 ctggaatataatctcatgcaattaaagaggaaaatgggttttttagccttgcaagcctga 292
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctggaatataagctcatgcaattaaagaggaaaatgggttttttagccttgcaagcctga 496
Query: 293 actctctcgagcactttcccttgcttaaatgatcatgactgtttgtatgtgggtgatatg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 actctctcgagcactttcccttgcttaaatgatcatgactgtttgtatgtgggtgatatg 556
Query: 353 ccctcctcgtgtgaaaaacgctattaagcccgc 385
|||||||||||||||| ||||||||||||||
Sbjct: 557 gtctcctcgtgtgaaaaatgctattaagcccgc 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 789
Length adjustment: 9
Effective length of query: 376
Effective length of database: 780
Effective search space: 293280
Effective search space used: 293280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_a24.g1 MSMg01no090_a24.g1 CHROMAT_FILE:
MSMg01no090_a24.g1 PHD_FILE: MSMg01no090_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:06 2005
(233 letters)
>mm_chr4_100643219_100643851
Length = 633
Score = 435 bits (225), Expect = e-126
Identities = 231/233 (99%)
Strand = Plus / Minus
Query: 1 gtgttgccagctgcttgaagtggaggcaagcactgggttggcccagaagatccagtcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtgttgccagctgcttgaagtggaggcaagcactgggttggcccagaagatccagtcggt 374
Query: 61 ggtacaggagcttgctgctgggtacagtgttgaggtttttcaattgtttgacgggtattt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggtacaggagcttgctgctcggtacagtgttgaggtttttcaattgtttgacgggtattt 314
Query: 121 ccggttgtatcaccacaatacacagaatgaaggaagtgtcctgtacctgtaaaaacaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccggttgtatcaccacaatacacagaatgaaggaagtgtcctgtacctgtaaaaacaaac 254
Query: 181 aaataagcaatgtattcctaatgcagaagattacatatagtatttgttttctg 233
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aaataagcaatggattcctaatgcagaagattacatatagtatttgttttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|