Query= MSMg01no092_j19.b1 MSMg01no092_j19.b1 CHROMAT_FILE:
MSMg01no092_j19.b1 PHD_FILE: MSMg01no092_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:31 2005
(371 letters)
>mm_chr4_71909537_71910307
Length = 771
Score = 648 bits (335), Expect = 0.0
Identities = 353/359 (98%)
Strand = Plus / Minus
Query: 13 tagctccagtaattactgtaggttataatgttaacttagctgctgatttactctagaatt 72
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tagctccagtaattactgtaagttataatgttaacttagctgctgatttactctagaatt 712
Query: 73 taatcaccatttttaagtgcttaagaggttttgtttgtttgtgattgggttttttgtttt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 taatcaccatttttaagtgcttaagaggttttgtttgtttgtgattgggttttttgtttt 652
Query: 133 gggtttttgtggtgattggaaatgaacctaggtcctcgaaaatgctaggcaaggtgctct 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gggtttttgtggtgattggaaatgaacctaggtcctcgaaaatgctaggcaaggtgctct 592
Query: 193 accactgagctacatccttatgtgtcttgagtttataaaattatgccataagtttacaat 252
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 591 accactgagctatatccttatgtgtcctgagtttataaaattatgccataagtttacaat 532
Query: 253 ttggaaaagaataaggccatatatgctaaagacttaaacatcattcattgctattttaac 312
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 531 ttggaaaagaataaggccatatatgctaaggacttaaacatcattcattgctattttaac 472
Query: 313 attttttgaaatatctatattttcttcctaggtatagtgcacatgcttttaatcctagc 371
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 471 attttttgaaatatctatattttcttgctaggcatagtgcacatgcttttaatcctagc 413
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_j19.g1 MSMg01no092_j19.g1 CHROMAT_FILE:
MSMg01no092_j19.g1 PHD_FILE: MSMg01no092_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:32 2005
(189 letters)
>mm_chr4_71829192_71829783
Length = 592
Score = 356 bits (184), Expect = e-103
Identities = 189/192 (98%), Gaps = 3/192 (1%)
Strand = Plus / Plus
Query: 1 ctccttctttcctttaat---ctaaaggagcagagcatgtgagaaccaccttaggtccta 57
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccttctttcctttaataatctaaaggagcagagcatgtgagaaccaccttaggtccta 260
Query: 58 cagtgggtggagctaaactccagcaaaggaagagacagaatgcccagctcactagatccc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgggtggagctaaactccagcaaaggaagagacagaatgcccagctcactagatccc 320
Query: 118 ttaatgcagaacaaataacttgtgattgacaagagaaaccaacttcaccagcaagaagag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaatgcagaacaaataacttgtgattgacaagagaaaccaacttcaccagcaagaagag 380
Query: 178 atagctgaactc 189
||||||||||||
Sbjct: 381 atagctgaactc 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 592
Length adjustment: 8
Effective length of query: 181
Effective length of database: 584
Effective search space: 105704
Effective search space used: 105704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
