Query= MSMg01no093_n09.b1 MSMg01no093_n09.b1 CHROMAT_FILE:
MSMg01no093_n09.b1 PHD_FILE: MSMg01no093_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:02 2005
(149 letters)
>mm_chr4_20651870_20652418
Length = 549
Score = 250 bits (129), Expect = 4e-71
Identities = 144/149 (96%)
Strand = Plus / Plus
Query: 1 aaagtgctattatagagcagtctttaatttctcttacacagaaaagcactaagtcaccct 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||
Sbjct: 201 aaagtgctattatagagcagtctttaatttcccttacacagaaaagcactaagttagcct 260
Query: 61 acggtttgttgtttctggtgagtgtaaaatacttgtcatctgttcaggtgggagttgttt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggtttattgtttctggtgagtgtaaaatacttgtcatctgttcaggtgggagttgttt 320
Query: 121 acttgataagtcaatatctatttgatcca 149
||||||||||||||| |||||||||||||
Sbjct: 321 acttgataagtcaatttctatttgatcca 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_n09.g1 MSMg01no093_n09.g1 CHROMAT_FILE:
MSMg01no093_n09.g1 PHD_FILE: MSMg01no093_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:02 2005
(368 letters)
>mm_chr4_20798113_20798880
Length = 768
Score = 547 bits (283), Expect = e-160
Identities = 337/359 (93%), Gaps = 8/359 (2%)
Strand = Plus / Minus
Query: 1 aactgactggaaactcatcaagtttcagctttgaaggcaatctcattaaatcatcaacat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 354 aactgactggaaactcatcaagtttcagctttgaagggaatctcattaaatcatcaacat 295
Query: 61 ggacaggaaacatagacagaatatgaagcctagagtcaaagatgaagagaacgaaaatct 120
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 294 ggataggaaacatagacagaatatgaagcctagagtcaaagatgaagagaaagaaaatct 235
Query: 121 gtccaaatcaaggagtttaagaaagttgactgaggctgggcgtggtggcacatgccttta 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 234 gtccaaatcaaggagtttaagaaagttgactgaggctgggcgtggtggcgtatgccttta 175
Query: 181 atcccagcatttgggaggcagaggcaggcggacttctgagttcgaggccagcctggtcta 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atcccagcatttaggaggcagaggcaggcggacttctgagttcgaggccagcctggtcta 115
Query: 241 cagagtgtgttccaggacagccagggctatacagagaaaccctgtctcaaaacaaaaaaa 300
||||||| |||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 114 cagagtgcgttccaggacagtcagggctacacagagaaaccctgtctcaaaa-----aaa 60
Query: 301 aaaaaaa---aaagttgagtgacagaggtagtattcattttgtttgctgaagtttggga 356
||||| | |||||||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 59 aaaaagactgaaagttgagtgacagagggaggaaacattttgtttgctgaagtttggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
