Query= MSMg01no094_g11.b1 MSMg01no094_g11.b1 CHROMAT_FILE:
MSMg01no094_g11.b1 PHD_FILE: MSMg01no094_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:02 2005
(320 letters)
>mm_chr4_98864897_98865617
Length = 721
Score = 555 bits (287), Expect = e-162
Identities = 305/313 (97%), Gaps = 5/313 (1%)
Strand = Plus / Plus
Query: 11 gaattccttaagattc---gatcagtgtaagatcaggcttctaggcgtacacatttattg 67
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattccttaagat--agagatcagtgtaagatcaggcttctaggcgtacacatttattg 268
Query: 68 ttagtatttttattgccctgcagtgatattataggttctttttttagttaaattttttct 127
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttagtatttttattgtggtgcagtgatattataggttctttttttagttaaattttttct 328
Query: 128 tgtgtgtcattgcttgtggggtgtgtgtgtgtctgtgtatgtaagagcttatctcattat 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgtgtgtcattgcttgtggggtgtgtgtgtgtctgtgtatgtaagagcttatctcattat 388
Query: 188 ctcactatatagccaggcctggaacttattgtgtaaaccagaatggcctcaagcccttag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ctcactatatagccaggcctggaacttattgtgtaaaccagaatggcctcaagcccttag 448
Query: 248 agatccgcctgcctctgcctcctgagtttagtgtatttgaataatggaaaatcactcaga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agatccgcctgcctctgcctcctgagtttagtgtatttgaataatggaaaatcactcaga 508
Query: 308 ttcttttggtatc 320
|||||||||||||
Sbjct: 509 ttcttttggtatc 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_g11.g1 MSMg01no094_g11.g1 CHROMAT_FILE:
MSMg01no094_g11.g1 PHD_FILE: MSMg01no094_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:02 2005
(342 letters)
>mm_chr4_99010014_99010755
Length = 742
Score = 569 bits (294), Expect = e-166
Identities = 312/318 (98%)
Strand = Plus / Minus
Query: 25 tgtgtacagtacgaggagctggccctcccacttcctcccatcccctcgttctgtctagga 84
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 542 tgtgtacaatacgaggagctggccctcccacttcctcccatccccacgttctgtctagga 483
Query: 85 gggctcctggctggcagagacaagagtgagaattgtccccatctcccatttccttggggt 144
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 gggctcctggctggcagagacaagagtgagaattggccccatctcccatttccttggggt 423
Query: 145 aagggcaatgtatgcaaatgaggttgcaccaatttgagcttaaaagtttgggaaggtgag 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagggcaatgtatgcaaatgaggttgcaccaatttgagcttaaaagtttgggaaggtgag 363
Query: 205 tgaagcaggcacagttcatctccgtcgggggtcaggggtcagggcatgagctgcaaactc 264
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgaagcaggcgcagttcatctccgtcgggggtcaggggtcagggcatgagctgcaaactc 303
Query: 265 tgggagtgcagcctggtggactccgtcgctggcgctgctggctctcacagagaagcagct 324
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 302 tgggagtgcagcctggtggactccgtcgctggtgctggtggctctcacagagaagcagct 243
Query: 325 gcctgggtggacaggcct 342
||||||||||||||||||
Sbjct: 242 gcctgggtggacaggcct 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
