Query= MSMg01no095_c13.b1 MSMg01no095_c13.b1 CHROMAT_FILE:
MSMg01no095_c13.b1 PHD_FILE: MSMg01no095_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:05 2005
(446 letters)
>mm_chr4_132657619_132658464
Length = 846
Score = 833 bits (431), Expect = 0.0
Identities = 437/439 (99%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 6 gaattcatcctcctcctcgccccagcttccc-acgactgaggagaagataggcctgtggc 64
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 438 gaattcatcctcctcct-gccccagcttcccaacgactgaggagaagataggcctgtggc 380
Query: 65 acacattgcccaaagctctcgccttatatttatttaacatatccacctcccaagacgggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acacattgcccaaagctctcgccttatatttatttaacatatccacctcccaagacgggc 320
Query: 125 aggttgcctttctccaccaaaagaagcagagaactcgcttgctaccttgaccttgtcggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggttgcctttctccaccaaaagaagcagagaactcgcttgctaccttgaccttgtcggt 260
Query: 185 ctggcagactccttgacccgcaggaggatgctcagagaccatctgtggaagacgtgtggc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctggcagactccttgacccgcaggaggatgctcagagaccatctgtggaagacgtgtggc 200
Query: 245 tcagttagtggagtgcttgcctaccatgcacgaagcccatagttgaagcaccatggaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tcagttagtggagtgcttgcctaccatgcacgaagcccatagttgaagcaccatggaaac 140
Query: 305 tgggcatgcctgtgttcttgtttagtctcaggcctttagtctaaagtgcctacctagcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 tgggcatgcctgtgttcttgtttagtctcaggcctttagtctaaagtgcctacctagcct 80
Query: 365 ctaggctagaggctgtgttcagggatcgtccctagctgcatttcaaggacagtgtgggat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ctaggctagaggctgtgttcagggatcgtccctagctgcatttcaaggacagtgtgggat 20
Query: 425 actctgggatacgtgagct 443
|||||||||||||||||||
Sbjct: 19 actctgggatacgtgagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_c13.g1 MSMg01no095_c13.g1 CHROMAT_FILE:
MSMg01no095_c13.g1 PHD_FILE: MSMg01no095_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:05 2005
(288 letters)
>mm_chr4_132534304_132534991
Length = 688
Score = 503 bits (260), Expect = e-147
Identities = 281/288 (97%)
Strand = Plus / Plus
Query: 1 tctctgtagaccaggcaggcctcacactcagagatctgcctgcctctgcctccttcccga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tctctgtagaccaggctggcctcacactcagagatctgcctgcctctgcctccctcccga 260
Query: 61 gtgctggaattaaaggtgtgtgtcatcagcacccagccaagttgattcctttctgtcgga 120
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gtgctggaattaaaggtttgtgtcatcagcacccagccgagttgattcctttctgtcgga 320
Query: 121 cttacttggggctggagttcagctctgtggtagagtggatgactgacacgtactaggttg 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttacctggggctggagttcagctctgtggtagagtggatgactgacacgtactaggttg 380
Query: 181 aaaccctagcatcagaacaagacccatatccatgaacaaaccaatgcttcagagtggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 aaaccctagcatcagaacaagacccatatccatgaacaaaccaatgcttcagagtggtcc 440
Query: 241 agagtgctggcggccatgacttgtgcggctccctttctgactttagca 288
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 agagtgctggcggccatgacttgtgcggctccctttctgacttaagca 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
