Query= MSMg01no097_l16.b1 MSMg01no097_l16.b1 CHROMAT_FILE:
MSMg01no097_l16.b1 PHD_FILE: MSMg01no097_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:34 2005
(237 letters)
>mm_chr4_130959463_130960091
Length = 629
Score = 342 bits (177), Expect = 8e-99
Identities = 219/237 (92%), Gaps = 8/237 (3%)
Strand = Plus / Minus
Query: 1 aagaccctctcttcccagctgttgggttattcagattcacagccttactgccaccttcta 60
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 429 aagaccctctcttcccagctgttgggttattcagatt--cagtcttactgccaccttcta 372
Query: 61 attgcagccccagccccagcccccacacatttccattttagctgttcacaaaggagcaaa 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 attg------cagccccagcccccacacatttccattttagctgttcacaaaggagcaaa 318
Query: 121 caccatagctgtgtaacggtgttgcttctgaggaaaccccagaccatctaggagcacgca 180
||||| |||| || ||||| ||||||||||||||| |||||||||||||||||||| |||
Sbjct: 317 caccagagctatggaacggagttgcttctgaggaagccccagaccatctaggagcaggca 258
Query: 181 agtagggaagtagactggaacaagggtcgggctctacatgcatgtttaaagtatggg 237
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct: 257 agtagggaagtagactggaacaagggtcaggctctacatgcatggttaaagtgtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 629
Length adjustment: 9
Effective length of query: 228
Effective length of database: 620
Effective search space: 141360
Effective search space used: 141360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_l16.g1 MSMg01no097_l16.g1 CHROMAT_FILE:
MSMg01no097_l16.g1 PHD_FILE: MSMg01no097_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:34 2005
(180 letters)
>mm_chr4_130797329_130797908
Length = 580
Score = 317 bits (164), Expect = 2e-91
Identities = 176/180 (97%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 1 cctggttgaacttgtctaagtactggtccttctaggtggcatgaagaagcccttgtagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggttgaacttgtctaagtactggtccttctaggtggcatgaagaagcccttgtagct 260
Query: 61 tgaggggacagctggtcagcttt-caggagatggtttctcctgctcaagggtacaggcct 119
|||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||
Sbjct: 261 tgaggggacagctggtca-cttttcaggagatggtttctcctgctttagggtacaggcct 319
Query: 120 gtcatcatggataactgccctgctatgagagtgatctgtcctgtgagacttggctgttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtcatcatggataactgccctgctatgagagtgatctgtcctgtgagacttggctgttcc 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
