MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-100C24
Chromosome	4 (Build37)
Map Location	103,784,700 - 103,785,096
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Wdr78, Mier1, Slc35d1, 4921539E11Rik, 4930456L15Rik, Oma1, LOC665451, LOC100039940, EG665460, LOC622315
Downstream gene	Dab1, C8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513
Link	Open Mouse BAC browser

Click to get alignment info.

name	Wdr78 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242584 MGI:2385328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mier1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71148 MGI:1918398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Slc35d1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242585 MGI:2140361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921539E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70941 MGI:1918191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 7 ESTs, 2 Proteins

name	4930456L15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71650 MGI:1918900
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Oma1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67013 MGI:1914263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665451 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039940 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 mRNAs, 3656 ESTs, 24 Proteins pseudo : _no_value

name	EG665460 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665460 MGI:3646873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC622315 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622315
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Dab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13131 MGI:108554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	C8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110382 MGI:88236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C8a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230558 MGI:2668347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700024P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242594 MGI:2685466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein

name	Prkaa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108079 MGI:1336173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Wdr78 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922612 GeneID:242584 MGI:2385328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 78 transcript_id : NM_146254.2

name	Mier1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872226 GeneID:71148 MGI:1918398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm induction early response 1 homolog (Xenopus laevis transcript_id : NM_027696.2

name	Mier1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872224 GeneID:71148 MGI:1918398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm induction early response 1 homolog (Xenopus laevis transcript_id : NM_001039081.1

name	Slc35d1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387362 GeneID:242585 MGI:2140361
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 transcript_id : NM_177732.3

name	4921539E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252807 GeneID:70941 MGI:1918191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein product : RIKEN cDNA 4921539E11 gene transcript_id : XM_001473197.1

name	4921539E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372182 GeneID:70941 MGI:1918191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 2 Proteins product : RIKEN cDNA 4921539E11 gene, transcript variant 1 transcript_id : XM_131605.5

name	4921539E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372183 GeneID:70941 MGI:1918191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 4921539E11 gene, transcript variant 2 transcript_id : XM_896041.2

name	Oma1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801898 GeneID:67013 MGI:1914263
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OMA1 homolog, zinc metallopeptidase (S. cerevisiae) transcript_id : NM_025909.2

name	EG665460 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252829 GeneID:665460 MGI:3646873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG665460 transcript_id : XM_001487792.1

name	Dab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909365 GeneID:13131 MGI:108554
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disabled homolog 1 (Drosophila) transcript_id : NM_010014.2

name	Dab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909360 GeneID:13131 MGI:108554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disabled homolog 1 (Drosophila) transcript_id : NM_177259.3

name	C8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381481 GeneID:110382 MGI:88236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 8, beta subunit transcript_id : NM_133882.2

name	C8a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122666 GeneID:230558 MGI:2668347
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 8, alpha polypeptide transcript_id : NM_146148.1

name	1700024P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94372162 GeneID:242594 MGI:2685466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein product : RIKEN cDNA 1700024P16 gene transcript_id : XM_161350.7

name	Prkaa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54792085 GeneID:108079 MGI:1336173
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, AMP-activated, alpha 2 catalytic subunit transcript_id : NM_178143.1

name	LOC100039513 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252809 GeneID:100039513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100039513 transcript_id : XM_001473391.1

name	Wdr78 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922613 GeneID:242584 MGI:2385328
definition	codon_start : 1 product : WD repeat domain 78 protein_id : NP_666366.2

name	Mier1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872227 CCDS:CCDS18408.1 GeneID:71148 MGI:1918398
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : mesoderm induction early response 1 isoform a protein_id : NP_081972.2

name	Mier1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872225 GeneID:71148 MGI:1918398
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : mesoderm induction early response 1 isoform b protein_id : NP_001034170.1

name	Slc35d1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244214 CCDS:CCDS18409.1 GeneID:242585 MGI:2140361
definition	codon_start : 1 product : solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 protein_id : NP_808400.1

name	4921539E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20840671 GeneID:70941 MGI:1918191
definition	codon_start : 1 product : hypothetical protein LOC70941 isoform 1 protein_id : XP_131605.1

name	4921539E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252808 GeneID:70941 MGI:1918191
definition	codon_start : 1 product : hypothetical protein LOC70941 protein_id : XP_001473247.1

name	4921539E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82894321 GeneID:70941 MGI:1918191
definition	codon_start : 1 product : hypothetical protein LOC70941 isoform 2 protein_id : XP_901134.1

name	Oma1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313180 CCDS:CCDS18412.1 GeneID:67013 MGI:1914263
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] codon_start : 1 product : OMA1 homolog, zinc metallopeptidase protein_id : NP_080185.1

name	EG665460 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252830 GeneID:665460 MGI:3646873
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001487842.1

name	Dab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909361 CCDS:CCDS18413.1 GeneID:13131 MGI:108554
definition	GO_component : GO:0005622 - intracellular [Evidence TAS] GO_function : GO:0005543 - phospholipid binding [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0042169 - SH2 domain binding [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007417 - central nervous system development [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007162 - negative regulation of cell adhesion [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045860 - positive regulation of protein kinase activity [Evidence IGI]; GO:0007243 - protein kinase cascade [Evidence TAS]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; yotari product : disabled homolog 1 isoform 2 protein_id : NP_796233.2

name	Dab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753596 GeneID:13131 MGI:108554
definition	GO_component : GO:0005622 - intracellular [Evidence TAS] GO_function : GO:0005543 - phospholipid binding [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI]; GO:0042169 - SH2 domain binding [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007417 - central nervous system development [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007162 - negative regulation of cell adhesion [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP]; GO:0045860 - positive regulation of protein kinase activity [Evidence IGI]; GO:0007243 - protein kinase cascade [Evidence TAS]; GO:0007264 - small GTPase mediated signal transduction [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; yotari product : disabled homolog 1 isoform 1 protein_id : NP_034144.1

name	C8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33563297 CCDS:CCDS18414.1 GeneID:110382 MGI:88236
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 product : complement component 8, beta subunit protein_id : NP_598643.1

name	C8a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122667 CCDS:CCDS18415.1 GeneID:230558 MGI:2668347
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005579 - membrane attack complex [Evidence IEA] [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006956 - complement activation [Evidence ISS]; GO:0006957 - complement activation, alternative pathway [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0019835 - cytolysis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 note : complement component 8 alpha subunit product : complement component 8, alpha polypeptide protein_id : NP_666260.1

name	1700024P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51709364 GeneID:242594 MGI:2685466
definition	codon_start : 1 product : hypothetical protein protein_id : XP_161350.5

name	Prkaa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54792086 CCDS:CCDS18416.1 GeneID:108079 MGI:1336173
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0004679 - AMP-activated protein kinase activity [Evidence TAS]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006950 - response to stress [Evidence TAS] codon_start : 1 exception : mismatches in translation product : AMP-activated protein kinase alpha 2 catalytic subunit protein_id : NP_835279.1

name	LOC100039513 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252810 GeneID:100039513
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473441.1

name	LOC665451 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665451
definition	number : 1 pseudo : _no_value

name	LOC622315 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622315
definition	number : 1 pseudo : _no_value

name	4930456L15Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94372160 GeneID:71650 MGI:1918900
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930456L15 gene transcript_id : XR_002342.1

name	LOC100039940 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252826 GeneID:100039940
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 mRNAs, 3656 ESTs, 24 Proteins product : similar to gamma-actin pseudo : _no_value transcript_id : XR_031401.1

clone name	MSMg01-295O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263D17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-468K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-112B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-100C24.T7 (MSMg01no100_c24.b1)	MSMg01-100C24.TJ (MSMg01no100_c24.g1)
ACC	AG315949	AG315950
length	710	1,136
length of high quality (start - end)	396 (61 - 456)	---
definition	CHROMAT_FILE: MSMg01no100_c24.b1 PHD_FILE: MSMg01no100_c24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:57:58 2005	CHROMAT_FILE: MSMg01no100_c24.g1 PHD_FILE: MSMg01no100_c24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:57:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TGCGGCGCTATACGACTCCTATATCGAGAGGATCCGCGGAATTCTTATTA TTTCAAACTGCCAACAGGTGTCTTTTATTTAATTTCTTCTTCTTCTGGTG AGCTGGAATAATCCCCTCTCTAGCAGGAAGTCGGTATTTTTTCTCATTCA CTTTTACGTCCTTAAGAGTGCCTTTAGCATTATTTTCTACTTGATAAAAC ACATCCTCTCAAGGCTTCGTTATTTTCACCCTGGTGTTATCTGATTGAAT ATTTCAATCATGGAAACTTGGCATATTTATTTCCTCTCTGAGACCACATA GAACTAAGGCATGGGGGGAGGTTGATGGTGTTTTAAAGGTTTTTCTCTAT GGGATACACAGGACTTTAAATGACCCAAGTGCATTCGAAGCCTGGATTCT TTTTTCTTTTTGACTAATAATTAAAATGTTCTTTTAGATGCAAGGCAATC AAACCAATTACAAATGCATCCTGCTTTATATCTAAGAAGGCCTTTGGAGA GAGGAAACATTCCCGTGAGACCCTGTTGGTTTCTTCAAAACTGCTTTTCC CTACCAACTCTACATAACTAACTACATAATTAAATACACCACTACATATA CTAATTAACTTAATAAATAATAGCCCGCTTGAGCTGGTTGTGGCGACTCC TTTTGCTTGGCTGCCCGAAGCTTAACTCTTCATATTGAACTCCTTGGGAA TTACCTTTGG	CCCCCCCCCCNNCCCCCCCCNNNNCCCCAGGTTTTCTNCCNTNCCCCCCC CTTTTTTNCTTTTTTTTTTTTTNNCTTTTTTTTTATATACAATACCATCT CCCTTCTTNTTTCTTTTCTTTNNTTTATTTCNNCCGCGCGCCCCCCCTNC CCCTTTCCCCCCCNACCCCCCCCCCTCACGCTCAACCGCAATATGATGAA TCCTCTCTTTGTCGTCGATCACCACAACCATACCCCTCATCATTCCCTGC CCGCGCCACCTTTATCAGTATTCTCCTCTTCTACCTCCACTCCCTCCACC TTCTTTTAACATCCTATATATCCTTTATCCAACCTCATCGCTCACAGAGT TATTTAATAAAAATATTTTTCATTATCAATAATAATATAATAAAAACGAC CGACCAATACTTGCAAAGTGGAACTGAGCGTAGGTACCAATGATAGTGAG CGGGAAAGAGGGAGGAAAGAAAACGGAGAGAAAAGAAGAGCAAAACACGG ACAACGCGCAACACGATGTTATTGGTGGGAGGAGATAGTGAAGTAATTAA TATATGTATAAGATCATTAAATTGTGAAATAAATCGCGCAACGACGGGCG TAAAGCAATTCAGAGACCCTGCACCGCTAGTGCTTGTAAGTAAACAAGAC GCATACGCAGAAGGAAGAGATATCAACGAGAAATGTGTTGTGATAAGTGG GAGATCACTAGAAATAGAGGAGAGGTACAGAAGTATAACAACTTTTATAT AGAGAGCGTATATTTGTAATATTGGGCGTATGCGGATACACGGCGACGCT TGTAAGGCGGGAGAAATATAACTATAACGCTATACTATTTATGAAGACAC ATTACCCTGTTACTTAGCAGCGATTATACGACAGAGTAGTGATAAGAGTA TGCGAACTCTGAGATATTCGCGCCACCGAAGGAGCGCATATCTATTGTGA CACCGCCCCCTATGATTACATTGTATACGGGCGCGGCATGGTCCGCCTAC GGTATTAAGAAAGAATACACTTGTGGAAGGGCCAGATGACATCTGAGAGG GACGTATGAGTGAAACNAGACTTGCCGAACGCGCACACGGATATAAGACA ACCTATGATGAAGTGTGATCAAGTGCACAAGTCTAG
quality values	Open. Hide. 14 15 22 13 16 17 22 11 9 9 15 14 19 15 13 19 9 10 10 21 21 10 10 10 10 9 9 13 13 16 16 20 22 24 24 37 37 44 36 36 36 33 33 33 50 42 41 27 21 13 10 9 10 11 11 11 19 22 30 20 20 24 30 26 28 35 35 36 50 50 50 50 50 50 57 57 57 57 57 57 57 57 50 50 50 57 57 57 68 68 57 57 57 54 54 50 50 50 50 68 68 68 68 54 54 41 41 47 48 47 47 57 57 57 57 57 57 57 68 57 57 47 46 46 50 50 46 50 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 51 50 57 57 68 57 57 57 57 57 57 57 57 68 68 68 57 50 50 50 50 50 57 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 52 52 52 57 57 57 57 57 57 57 57 57 57 57 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 52 52 62 62 62 62 62 62 68 68 62 62 62 62 38 34 15 15 15 15 26 26 15 23 38 43 43 57 57 57 57 57 57 57 57 52 52 52 52 52 57 57 57 57 57 57 57 44 44 35 43 43 57 52 57 57 57 57 43 43 19 24 12 24 24 20 38 19 17 20 24 27 32 43 43 43 50 52 52 52 57 52 52 43 43 28 28 28 35 35 42 43 43 43 29 29 32 43 43 43 38 38 17 17 17 32 38 50 44 44 44 43 43 43 43 42 42 43 43 42 42 32 24 17 10 10 10 15 24 32 28 22 22 28 24 32 20 20 20 28 34 42 38 36 19 19 16 27 26 23 20 15 15 14 14 14 19 29 33 28 28 24 27 19 22 22 24 24 32 22 22 22 24 21 21 18 18 21 30 30 32 28 28 29 28 21 15 19 13 14 10 10 10 8 10 17 20 23 24 21 21 28 32 32 20 20 20 23 26 32 25 25 25 22 24 22 25 22 28 28 25 24 20 20 13 12 10 10 10 13 19 23 28 23 24 14 9 9 9 9 12 21 16 15 11 11 15 17 28 28 28 23 28 18 26 21 28 20 20 16 18 16 18 16 12 13 11 11 11 22 11 10 13 10 12 11 8 8 8 8 9 9 9 10 9 9 10 10 19 12 12 12 10 10 8 6 6 6 8 8 8 8 8 10 10 13 10 10 9 9 9 14 14 24 12 10 8 8 8 10 15 19 12 11 10 10 9 10 8 10 8 8 6 8 6 6 8 7 19 23 19 19 11 15 12 14 18 15 14 21 19 10 10 8 8 8 8 8 8 13 14 16 14 16 14 17 14 12 13 8 8 8 8 8 10 12 9 9 10 10 8 8 8 8 8 9 8 8 10 10 8 8 8 8 8 10 10 10 10 10 12 10 9 12 9 9 10 10 11 9 9 9 9 8 8 9 9 9 9	Open. Hide. 8 15 6 6 6 8 7 7 7 3 0 0 3 7 7 9 9 7 7 3 0 0 0 0 3 14 15 8 6 6 6 7 9 7 8 8 3 0 3 3 0 3 0 3 16 21 32 30 24 24 9 9 6 6 6 13 3 0 3 18 21 39 39 9 9 9 9 9 9 12 12 3 0 0 3 18 19 24 21 21 28 19 11 11 8 17 10 10 8 8 10 15 15 10 8 8 9 8 8 21 27 28 19 13 9 9 9 3 0 3 8 6 7 7 6 6 6 6 6 8 3 0 0 3 10 10 11 8 8 8 3 0 0 3 8 8 9 11 10 9 9 16 16 24 25 25 12 3 0 3 19 19 11 11 11 16 16 9 9 8 8 10 3 0 3 8 8 15 19 39 39 44 33 19 10 10 9 12 9 9 8 8 8 8 8 8 10 10 9 8 8 8 8 8 8 8 8 10 10 9 9 10 21 21 12 9 8 8 10 10 11 10 8 8 9 8 8 6 6 8 8 11 11 11 9 10 8 8 8 8 8 9 10 8 8 6 6 8 8 8 8 8 8 8 11 11 11 13 14 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 10 9 9 9 10 9 8 8 8 8 8 8 8 8 8 10 8 8 8 8 11 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 9 10 9 9 10 10 10 15 10 10 10 10 9 11 11 17 11 13 19 8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 8 6 8 6 6 6 8 11 8 8 8 8 8 8 12 10 8 8 6 6 8 8 12 8 8 8 8 8 8 8 8 7 7 7 12 10 8 6 6 8 8 8 11 15 10 10 10 10 10 6 6 6 6 6 6 8 9 13 13 11 16 10 15 15 9 9 9 8 6 6 6 8 8 8 10 8 8 8 6 6 6 6 9 9 9 10 10 10 9 9 9 10 10 11 11 10 9 9 9 10 10 8 8 8 8 8 8 8 8 9 15 12 8 8 8 8 8 8 10 10 10 10 10 10 10 11 12 11 8 6 8 6 6 8 8 9 9 8 10 10 12 9 10 10 8 8 8 8 8 8 10 10 8 8 8 8 11 8 8 6 6 8 8 10 8 8 8 9 9 8 8 6 6 6 8 8 10 10 8 10 8 8 6 6 6 7 10 8 8 8 8 8 8 10 8 8 10 8 10 13 10 9 9 8 10 7 7 8 10 8 8 8 8 8 6 6 8 6 6 8 8 8 8 6 6 8 7 7 10 13 14 11 10 8 8 8 8 8 8 8 8 6 6 6 8 8 8 9 9 10 8 8 8 10 6 6 8 8 8 9 11 11 11 13 11 12 11 8 8 6 6 8 8 9 9 10 10 10 10 10 10 10 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 11 12 9 11 11 11 11 12 8 8 8 8 8 8 8 8 8 8 10 7 9 12 10 8 8 8 8 10 10 12 10 8 8 8 8 8 10 10 8 6 6 6 6 6 8 8 11 10 10 8 6 6 8 8 6 6 8 8 12 8 8 8 8 8 8 12 10 8 8 8 9 8 8 8 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 9 10 11 11 10 10 10 11 11 17 11 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 10 10 12 9 9 10 8 10 10 10 10 8 10 7 7 8 6 6 8 8 9 6 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 9 9 9 8 8 8 6 6 6 6 8 8 8 8 6 6 8 8 9 12 8 8 8 8 8 8 11 12 11 8 8 8 8 10 10 8 8 7 7 10 6 6 8 6 8 8 8 8 8 12 11 8 9 9 8 8 6 6 8 8 8 8 8 8 7 8 8 6 6 8 8 12 12 8 6 6 6 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 12 10 10 10 9 9 9 7 7 8 10 8 8 8 7 8 12 8 10 10 9 9 8 8 8 6 8 6 6 8 8 9 8 10 8 8 8 8 8 8 8 6 6 6 6 10 7 6 8 8 10 8 8 8 8 8 8 8 11 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 6 6 6 7 8 8 6 8 6 8 6 6 8 6 6 6 7 8 8 8 8 7 8 8 9 9 10 13 10 6 6 6 6 8 10 19 16 12 12 10 11 11 11 10 10 9 9 8 8 10 8 8 8 8 8 8 8 10 9 9 9 7 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 8 8 6 6 6 6 3 0 3 8 8 7 7 7 8 8 11 9 8 8 8 8 8 8 8 9 9 9 9 10 10 9 9 8 8 10 15 10 8 6 6 6 10 12 12 15 13 8 8 6 8 8 11 8 9 6 8 6 6 8 8 9 9 12 9 9 8 8 6 7 8 6 6 6 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no100_c24.b1 MSMg01no100_c24.b1 CHROMAT_FILE:
MSMg01no100_c24.b1 PHD_FILE: MSMg01no100_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:58 2005
         (396 letters)



>mm_chr4_103784500_103785296
          Length = 797

 Score =  690 bits (357), Expect = 0.0
 Identities = 387/397 (97%), Gaps = 1/397 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaacaggtgtcttttatttaatttcttcttcttctggtgagctggaataatcccctctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaacaggtgtcttttatttaatttcttcttcttctggtgagctggaataatcccctctc 260

                                                                       
Query: 61  tagcaggaagtcggtattttttctcattcacttttacgtccttaagagtgcctttagcat 120
           | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcaggaagtcggcattttttctcattcacttttacgtccttaagagtgcctttagcat 320

                                                                       
Query: 121 tattttctacttgataaaacacatcctctcaaggcttcgttattttcaccctggtgttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattttctacttgataaaacacatcctctcaaggcttcgttattttcaccctggtgttat 380

                                                                       
Query: 181 ctgattgaatatttcaatcatggaaacttggcatatttatttcctctctgagaccacata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgattgaatatttcaatcatggaaacttggcatatttatttcctctctgagaccacata 440

                                                                       
Query: 241 gaactaaggcatggggggaggttgatggtgttttaaaggtttttctctatgggatacaca 300
           | |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gtactaaggtgtggggggaggttgatggtgttttaaaggtttttctctatgggatacgca 500

                                                                       
Query: 301 ggactttaaatgacccaagtgcattcgaagcctggattctttttt-ctttttgactaata 359
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 501 ggactttaaatgacccaagtgcattcgaagcctggattctttttttctttttgactatta 560

                                                
Query: 360 attaaaatgttcttttagatgcaaggcaatcaaacca 396
           ||||||||||||||| |||||||||| ||||||||||
Sbjct: 561 attaaaatgttctttcagatgcaaggtaatcaaacca 597


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 797
Length adjustment: 9
Effective length of query: 387
Effective length of database: 788
Effective search space:   304956
Effective search space used:   304956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information