Query= MSMg01no100_k24.b1 MSMg01no100_k24.b1 CHROMAT_FILE:
MSMg01no100_k24.b1 PHD_FILE: MSMg01no100_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:38 2005
(276 letters)
>mm_chr4_98282672_98283347
Length = 676
Score = 513 bits (265), Expect = e-150
Identities = 271/273 (99%), Gaps = 1/273 (0%)
Strand = Plus / Plus
Query: 5 ggaattc-ctctgtataccaggctggcctcaaactcaaaaatctgcttgtctctgactcc 63
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggctggcctcaaactcaaaaatctgcttgtctctgactcc 263
Query: 64 caacttctgggattaaaggcgtgtgccacaactgccccttttgggtggattttaaaacgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caacttctgggattaaaggcgtgtgccacaactgccccttttgggtggattttaaaacgt 323
Query: 124 gttactactgccgtgtgtggcagcacttagctcccaacagtggacactaaggcaagagaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttactactgccgtgtgtggcagcacttagctcccaacagtggacactaaggcaagagaa 383
Query: 184 ccatgggcccagccagtctgggtggcatagtgagactccgtgtgtttaaaagaaggtttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccatgggcccagccagtctgggtggcatagtgagactccgtgtgtttaaaagaaggtttg 443
Query: 244 gtagaagaagctgaaacatggacgaagagtaca 276
|||||||||||||||||||||||||||||||||
Sbjct: 444 gtagaagaagctgaaacatggacgaagagtaca 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no100_k24.g1 MSMg01no100_k24.g1 CHROMAT_FILE:
MSMg01no100_k24.g1 PHD_FILE: MSMg01no100_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:38 2005
(113 letters)
>mm_chr4_98438433_98438945
Length = 513
Score = 199 bits (103), Expect = 4e-56
Identities = 109/111 (98%)
Strand = Plus / Minus
Query: 1 aaaccttaggatgcgaatctctctcaccttgcccctgcttgagagacagtaggtttttaa 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aaaccttaggatgtgaatctctctcaccttgcccctgcttgagagacagtaggtttttaa 252
Query: 61 atgacctcaccctatagaatcctgaaaacaaggatgccagatccagtttat 111
|| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 attacctcaccctatagaatcctgaaaacaaggatgccagatccagtttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 513
Length adjustment: 8
Effective length of query: 105
Effective length of database: 505
Effective search space: 53025
Effective search space used: 53025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
