CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTACTATTGACTCAACAAGATGACTAAAGTAAAGGAAATTGCCACCAA
CCATGATGAACTGAATTTAATTTCCAAGACCCACATAGTGGAAGGAAATA
CGTGATTCCTACAGGCTGTCCCCTGACCTCCAAATGCACATCATGGACTG
TGTGTCTCCCCACCTCACCCCCCTAGCAAAAACAAAAACCACACAAAACA
ATCAAACAACAACAAAACATGTATGTAAGTGTAGAAACATTCTTGAAAAA
ATAGAAAAACATTCACTGGTTTTTCAATGTGAAACAAAATAACTGTTTCT
ACATTCAGTTTGTCATTCACATCTCTTTCCTTCTGAGGCTAGAACAACCA
CTGTTGTGCCCACAAATACAATAAAGCATATATCTGTATGTCTGCACTCT
GTGTGAATGTTAGTGCCTCCAGGTGTTTGAAATATGCTCAGCTGTTGAAT
TGTGAATAATAATGGGAAATTCAAAGATTTTAAATGAGTACTGAATATTA
GAGCCATTTCTTTTTCTCCCTGGTAGCTTCATCATCCTTCTCAAGGTTTT
CGTTTTGGAACTGTCCGGGAAAGCAGTGCTGAGGACTATGTACGGCAGAG
CTTCCCAGAGATGCATGAGTACATGAGAAGGTACAATGTACCAGCCACCC
CTGATGGAGTTCAGTACCTGAAGTAAGTGAN

TCTATATCCTATACCGCCCACACTCCTATTCCTTCCCCCCCTCCCGCCAG
AATACATTATATCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAA
AACAGGGAGGTGACACTATAGAATGTTCCCCGCCAATTCAGAACTCTTCA
GCTGAGGAACGGCGGCACCGGTAAGTAGAAAGAAATTAATGTGAGTCTCT
TGAGAAGCATGCTCTCCTCAAGAAATAGGTATCTTGGTAAAGAGAAAAAT
AGGATCTCCGGTTCTTGGAGACAAGAAAGTGAAAGTAAGAGAGAAAGTGA
AAGTTTGAGGAAAGTGAATGTTAGAGGATAATAGGGACAGTCTATGGTTT
ACTTTCTTTTTCTAGCCATTGGAGTAATTTTTCTGAGTTTTTTTTGTTGC
AGTGTCGACTGCGTGGAACATGAAAGATCTTGTATGGCGTCATCACAGCC
ACACCCAATTTTTTCAGCGCTCGATGATCTGCTATGAGTGAATGGCGCAT
TAACTATATCTGTTAGTGTCATAATTCAACCTTCTGTATCTCCATGGAAT
ACCCATAAATTTTGTTATCAGAGATAAATCGGCTATATGTAGGTTGTTAC
AGCATCAGTAAGCTTTTAATGCACATATGCTTGTGATGGACTCCTTCTCT
AGGTGTCTTGTCTTTCTTGTGTGATCTGCCAAAATAAAGGGCTTTTAAAG
ACAGCTCCTTTTTCATCTTCACATTACATCCCTAACATCCAACCTATATT
TGCATTCATCCTGACATTCGATAATTCTAATGTAGTCTTGTTACTTGTAT
ACTTGTTGCTT

Query= MSMg01no101_e17.b1 MSMg01no101_e17.b1 CHROMAT_FILE:
MSMg01no101_e17.b1 PHD_FILE: MSMg01no101_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:27 2005
         (588 letters)



>mm_chr4_49731857_49732846
          Length = 990

 Score = 1083 bits (560), Expect = 0.0
 Identities = 582/590 (98%), Gaps = 2/590 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatgactaaagtaaaggaaattgccaccaaccatgatgaactgaatttaatttccaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 agatgactaaagtaaaggaaattgccaccaaccatgatgaactgaatttaatttccaaga 858

                                                                       
Query: 61  cccacatagtggaaggaaatacgtgattcctacaggctgtcccctgacctccaaatgcac 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 857 cccacatagtggaaggaaatacgtgattcctataggctgtcccctgacctccaaatgcat 798

                                                                       
Query: 121 atcatggactgtgtgtctccccacctcacccccctagcaaaaacaaaaaccacacaaaac 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 797 atcatggactgtgtgtctccccaccttacccccctagcaaaaacaaaaaccacacaaaac 738

                                                                       
Query: 181 aatcaaacaacaacaaaacatgtatgtaagtgtagaaacattcttgaaaaaatagaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aatcaaacaacaacaaaacatgtatgtaagtgtagaaacattcttgaaaaaatagaaaaa 678

                                                                       
Query: 241 cattcactggtttttcaatgtgaaacaaaataactgtttctacattcagtttgtcattca 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cattcactgggttttcaatgtgaaacaaaataactgtttctacattcagtttgtcattca 618

                                                                       
Query: 301 catctctttccttctgaggctagaacaaccactgttgtgcccacaaatacaataaagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 catctctttccttctgaggctagaacaaccactgttgtgcccacaaatacaataaagcat 558

                                                                       
Query: 361 atatctgtatgtctgcactct--gtgtgaatgttagtgcctccaggtgtttgaaatatgc 418
           |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 557 atatctgtatgtctgcactctttgtgtgaatgttagtgcctccaggtgtttgaaatatgc 498

                                                                       
Query: 419 tcagctgttgaattgtgaataataatgggaaattcaaagattttaaatgagtactgaata 478
           |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcagttgttgaattgtgaatcataatgggaaattcaaagattttaaatgagtactgaata 438

                                                                       
Query: 479 ttagagccatttctttttctccctggtagcttcatcatccttctcaaggttttcgttttg 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttagagccatttctttttctccctggtagcttcatcatccttctcaaggttttcgttttg 378

                                                             
Query: 539 gaactgtccgggaaagcagtgctgaggactatgtacggcagagcttccca 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaactgtccgggaaagcagtgctgaggactatgtacggcagagcttccca 328


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 990
Length adjustment: 10
Effective length of query: 578
Effective length of database: 980
Effective search space:   566440
Effective search space used:   566440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)