Query= MSMg01no101_g15.b1 MSMg01no101_g15.b1 CHROMAT_FILE:
MSMg01no101_g15.b1 PHD_FILE: MSMg01no101_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:37 2005
(676 letters)
>mm_chr4_65736292_65737366
Length = 1075
Score = 1236 bits (639), Expect = 0.0
Identities = 663/671 (98%), Gaps = 1/671 (0%)
Strand = Plus / Plus
Query: 6 ggaattcttaatttacgatgcttctttccaggtaactaggttatatctagttgacaataa 65
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcttaattgaggatgcttctttccaggtaactaggttatatctagttgacaataa 265
Query: 66 aaactaaccaagacagtgtggacttatgcgtgcatgtgcaagaaggaggatgatcttggt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaactaaccaagacagtgtggacttatgcgtgcatgtgcaagaaggaggatgatcttggt 325
Query: 126 gttgtctacaggaatttcaactattttgggacaagatttctcagtggcctggacatcacc 185
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 gttgtctataggaatttcaactatttggggacaagatttctcagtggcctggacatcacc 385
Query: 186 aattacattgacaattcagcgagctccaatgtgtgtcatcacatgtagcatttcttaggt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aattacattgacaattcagcgagctccaatgtgtgtcatcacatgtagcatttcttaggt 445
Query: 246 aggtgctgcagattagatgcagatcctcatgtttacaaggcaaacaattttctaaatgaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aggtgctgcagattagatgcagatcctcatgtttacaaggcaaacaattttctaaatgaa 505
Query: 306 tgacttatcgagtcgacagagttattttgacaataatggctacctgccatacatagtggc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgacttatcgagtcgacagagttattttgacaataatggctacctgccatacatagtggc 565
Query: 366 cagcacactgtacagagatgactacacatgagcttaggtctcacatactgacaggcaaga 425
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 566 cagcacactgtacagagatgactatacatgagcttaggtctcacatactgacaggcaaga 625
Query: 426 gtagcaatagttcttaaccaacgttggggaatctcacacgtaagctgtaagaggttgatt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gtagcaatagttcttaaccaacgttggggaatctcacacgtaagctgtaagaggttgatt 685
Query: 486 cagaaactggtttatccaaattcccagaagactctggagcatatctgtggctcgtgttga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 686 cagaaactggtttatccaaattcccagaagactctggagcatatctgtggctcatgttga 745
Query: 546 attttaaaatttatctttatggtgaaatatatttacaataaaaatacaatttaacatgat 605
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 746 attttaaaatttatctttatggtgaaatatatttacaataaaa-tacaatttaagatgat 804
Query: 606 ttttataatttcataaaaagtagaattacacacatttatagaagacgttaaaaattacag 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttataatttcataaaaagtagaattacacacatttatagaagacgttaaaaattacag 864
Query: 666 cctatctctaa 676
|||||||||||
Sbjct: 865 cctatctctaa 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1075
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1065
Effective search space: 709290
Effective search space used: 709290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_g15.g1 MSMg01no101_g15.g1 CHROMAT_FILE:
MSMg01no101_g15.g1 PHD_FILE: MSMg01no101_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:37 2005
(240 letters)
>mm_chr4_65859791_65860430
Length = 640
Score = 464 bits (240), Expect = e-135
Identities = 240/240 (100%)
Strand = Plus / Minus
Query: 1 ctgcaggttagataaataaccggagagtcttaggactaggccagtttgcagatactttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgcaggttagataaataaccggagagtcttaggactaggccagtttgcagatactttgt 381
Query: 61 tctcttaaggaaatctgagaggactataagcaaaaagttgaatttttccagcagaaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcttaaggaaatctgagaggactataagcaaaaagttgaatttttccagcagaaagta 321
Query: 121 cttttgcttattttgcttatcttaatcctattttttttctgtggaatttctgctcctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttttgcttattttgcttatcttaatcctattttttttctgtggaatttctgctcctgtt 261
Query: 181 tccttcctaatgttttctccctacaatgcccgcaccatttgatcctctgctaagcataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tccttcctaatgttttctccctacaatgcccgcaccatttgatcctctgctaagcataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
