Query= MSMg01no102_a10.b1 MSMg01no102_a10.b1 CHROMAT_FILE:
MSMg01no102_a10.b1 PHD_FILE: MSMg01no102_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:28 2005
(137 letters)
>mm_chr4_36036213_36036749
Length = 537
Score = 257 bits (133), Expect = 2e-73
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 1 aacaaatatgagtgacctcaaatcagcttcatcatggaaagcattactgtaacatggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaatatgagtgacctcaaatcagcttcatcatggaaagcattactgtaacatggagg 260
Query: 61 aggacttcatcatagcagtctagatgggattccctttcagctaactttctaccttctata 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aggacttcatcatagcagtctagatgggattccctttcagttaactttctaccttctata 320
Query: 121 tcttccagcacctctca 137
|||||||||||||||||
Sbjct: 321 tcttccagcacctctca 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 137
Length of database: 537
Length adjustment: 8
Effective length of query: 129
Effective length of database: 529
Effective search space: 68241
Effective search space used: 68241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_a10.g1 MSMg01no102_a10.g1 CHROMAT_FILE:
MSMg01no102_a10.g1 PHD_FILE: MSMg01no102_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:28 2005
(246 letters)
>mm_chr4_36162849_36163493
Length = 645
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 aggatgtcagagaaaattaacacagttttgaatacagtaaatttgacacatctaattttt 60
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 aggatgtcagagaaaattaatacagttttgaatacagtaaatttgaaacatctaattttt 384
Query: 61 gcaatcacagaggtatctagagagttgtttattttcaataagtctcaaataagcaattgg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcaatca-agaggtatctagagagttgtttattttcaataagtctcaaataagcaattgg 325
Query: 121 agaaatgaatgaaagcatgatttacccttcaccgttgaaaacaaatcaataacacgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaaatgaatgaaagcatgatttacccttcaccgttgaaaacaaatcaataacacgaagt 265
Query: 181 gttctttctttctctgttgttatgggaagtaaagattatgaaaggaagggtaactggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttctttctttctctgttgttatgggaagtaaagattatgaaaggaagggtaactggaat 205
Query: 241 gatt 244
||||
Sbjct: 204 gatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
