Query= MSMg01no103_l14.b1 MSMg01no103_l14.b1 CHROMAT_FILE:
MSMg01no103_l14.b1 PHD_FILE: MSMg01no103_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:44 2005
(110 letters)
>mm_chr4_100882558_100883068
Length = 511
Score = 199 bits (103), Expect = 4e-56
Identities = 109/111 (98%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 1 gaccccaaagtttctactttatatacttcaaataattat-tcaaaataatgtcaaaacca 59
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 gaccccaaagtttctactttatatacttcaaataattatatcaaaataatgtcaaaacca 260
Query: 60 caatgctctctttatataatatttagaatttaatatctatcttttttaggg 110
||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 caatgctctctttatataatatttataatttaatatctatcttttttaggg 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 511
Length adjustment: 8
Effective length of query: 102
Effective length of database: 503
Effective search space: 51306
Effective search space used: 51306
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no103_l14.g1 MSMg01no103_l14.g1 CHROMAT_FILE:
MSMg01no103_l14.g1 PHD_FILE: MSMg01no103_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:44 2005
(205 letters)
>mm_chr4_101032842_101033446
Length = 605
Score = 358 bits (185), Expect = e-103
Identities = 200/205 (97%)
Strand = Plus / Minus
Query: 1 ctcctggtggataatgaataaacacttgtttaataaagtacaactggagcgcgagttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 405 ctcctggtggataatgaataaacacttgtttaataaagtacaactggagtgtgagttctt 346
Query: 61 ccagagcaaagtccttatcttcatcgtgcgtgtttcttagcacctgactcagggctggga 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 345 ccagagcaaagtccttatcttcatcgttcgtgtttcttagcacctgactcagggctggga 286
Query: 121 acaagttccttagaaaatgattcttgattaaagtgttttaattaattaacaactagaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 285 acaagttccttagaaaatgattcttgattaaagtgttttaattaattaacaactaaaagg 226
Query: 181 gcttcctattagctacgtttctcca 205
||||||||||| |||||||||||||
Sbjct: 225 gcttcctattaactacgtttctcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
