Query= MSMg01no103_o15.b1 MSMg01no103_o15.b1 CHROMAT_FILE:
MSMg01no103_o15.b1 PHD_FILE: MSMg01no103_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:58 2005
(302 letters)
>mm_chr4_40282510_40283211
Length = 702
Score = 524 bits (271), Expect = e-153
Identities = 292/299 (97%)
Strand = Plus / Minus
Query: 1 agaatatagatgtgaagtaacatgtcttcactagcctggaagtcaagacccactcacctc 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 499 agaatatagatgtgaagtaacatgtcttcactagcctggaaatcaagacccactcacctc 440
Query: 61 cagtcaagggatgaccttcagaatgccatgggctccttcctaatgtagagcttatgtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 439 cagtcaagggatgaccttcagaatgccatgggctccttcctaatgtagagcatgtgtgag 380
Query: 121 agaaaaagcattccaagttctcttctgtcttattcccaacctagatttgaaacttctctt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agaagaagcattccaagttctcttctgtcttattcccaacctagatttgaaacttctctt 320
Query: 181 tatactgagcgattgagtcataatgattgctcatgataattcattaggaagcattattac 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tatactgagtgattgagtcataatgattgctcatgataattcattaggaagcattattac 260
Query: 241 ttgtcattattatcttcgataatctagatgattgccctggagggtttagcagctaatga 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttgtcattattatcaccgataatctagatgattgccctggagggtttagcagctaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no103_o15.g1 MSMg01no103_o15.g1 CHROMAT_FILE:
MSMg01no103_o15.g1 PHD_FILE: MSMg01no103_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:59 2005
(285 letters)
>mm_chr4_40137182_40137866
Length = 685
Score = 489 bits (253), Expect = e-143
Identities = 277/289 (95%), Gaps = 8/289 (2%)
Strand = Plus / Plus
Query: 1 actgcttcccttggcctgcaggccctgattattcatggcaaattcaggcccacgtgtagt 60
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 actgcttcccttggcctgtaggccctgattattcagggcaaattcaggcccacgtgtagt 260
Query: 61 cagtggagtatatcccgttgccctccattctctgatccatcctgctggcctccctattgc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtggagcatatcccgttgccctccattctctgatccatcctgctggcctccctattgc 320
Query: 121 ttttaattcagttttcacttaggtgtagctgtgtgagcttcccgctgaattaagaggaga 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ttttaattcagttttcacttaggtgtagctgtgtgagcttcccgctgagttaagaggaga 380
Query: 181 tccagatcctcttgagttgatcccagggagtatggattcctgctctactctgctcctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagatcctcttgagttgatcccagggagtatggattcctgctctactctgctcctgcc 440
Query: 241 tg----acttttccagttaaggctttgagaacaacctgcgtgcagagca 285
|| || |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctgac----ccagttaaggctttgagaacaacctgcgtgcagagca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
