ACGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATACATGACCCCCAAAATTCTACTCAGAATCTCCAACAGCTA
ATAAATACTTTCTGTGAAGTGGCTGGATAGAAATGTAACACACACACATA
CACACACACACACACACACACACACACACACACACACACACACACACAAA
ACAACAAAAAACCAGTAGCCTTCCTATATACACATGATAAACAGGCTGAG
AAAATAAATTAGAGAAACAACGCTATTCACAATAGCCACAAATAATATAA
AATATCTTGGGGTAACTCTACCTAAGCAGGTGAAAGATCTGTATGACAAG
GACTTTAAGTCTTTGAAGAAGGAAACTGAAGAAAGTATCAAACAATAGAA
AGATCTCGCATGCTCATGGATCATAGGAGTAACATAGTAAAAATGGCCAT
CCTACCAAAAGCAATCTACAGATTCAAGAATACAATCTCTTTCAACACAA
TTCTTTCTAGATCTTGAAAGAACAATACTCAAGTTCATATGAAAAAAACA
TGAAACCCAGGAGAGCTAAAATAATTGTATCCTATACAATAAAAGTATTT
CCGAAGTTATCCACCCACCCCATTTCAAGCTGTACTTCAGAGCTATAGTA
ATATAAAACTGTATGGTATTAGCATAAAAATGGGCAGGTTGATCAATTGA
ATCAAATAAAAGACCCAGAAA

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAAGCCATGTATGCATTCTGTGCTATT
TAGAGTTTATCTGGACAGCACCAAAGGATGATCTCATGGTTTTCAGGTGT
GATGCAGGTCTTAGGATGTGATTAATGACTCATGCAAGGATGTGTGGTAT
GCTCTGGACAACTCCAGCTGTGTGCAGTGGTCTTGACTCTTTCCTTTTGT
TACTCATTTCGTTTTCTATGCTTCTAGATAAGCCTAACCTCTATAGATAT
CTTCATTTTATTTACAAATTTCCCTATAGATTATATAAAGCAAAAGTTTC
AGAAGAAAAAAACTATAAGTGATTAAAGTCAAAGAACATCTCTAATGAGA
TTATATTTATATTGTCAATGTTAATTATATTATGATGTTAATAATATAAT
CTGGTTTTATCTCAGCCACATTTAAGTTCAGGTTTGTTTTCATTGGATGT
TGTATTAAACAGAGGAGAATAACAAGCCACAGTGATGACAACCTGAAACA
GCTTAGCAGCACACCTTATCTTCAGCTATGTAGCTAATATGTATTCCTCA
TTTTATTATCATATCTACTTTATAGCTGAGAAATTTGAGACATGGGGAGA
CTAAATGTCTTGCCTAAAGTAATCCTGTCCACAAATGGCAGAGTCAGGGT
TTTGCTCCC

Query= MSMg01no103_p15.g1 MSMg01no103_p15.g1 CHROMAT_FILE:
MSMg01no103_p15.g1 PHD_FILE: MSMg01no103_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:04 2005
         (636 letters)



>mm_chr4_5840764_5841799
          Length = 1036

 Score = 1207 bits (624), Expect = 0.0
 Identities = 633/636 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagccatgtatgcattctgtgctatttagagtttatctggacagcaccaaaggatgatc 60
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagccatgtatacattctgtgctatttagagtttatctggacagcaccaaaggatgatc 260

                                                                       
Query: 61  tcatggttttcaggtgtgatgcaggtcttaggatgtgattaatgactcatgcaaggatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatggttttcaggtgtgatgcaggtcttaggatgtgattaatgactcatgcaaggatgt 320

                                                                       
Query: 121 gtggtatgctctggacaactccagctgtgtgcagtggtcttgactctttccttttgttac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggtatgctctggacaactccagctgtgtgcagtggtcttgactctttccttttgttac 380

                                                                       
Query: 181 tcatttcgttttctatgcttctagataagcctaacctctatagatatcttcattttattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatttcgttttctatgcttctagataagcctaacctctatagatatcttcattttattt 440

                                                                       
Query: 241 acaaatttccctatagattatataaagcaaaagtttcagaagaaaaaaactataagtgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaaatttccctatagattatataaagcaaaagtttcagaagaaaaaaactataagtgat 500

                                                                       
Query: 301 taaagtcaaagaacatctctaatgagattatatttatattgtcaatgttaattatattat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaagtcaaagaacatctctaatgagattatatttatattgtcaatgttaattatattat 560

                                                                       
Query: 361 gatgttaataatataatctggttttatctcagccacatttaagttcaggtttgttttcat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgttaataatataatctggttttatctcagccacatttaagttcaggtttgttttcat 620

                                                                       
Query: 421 tggatgttgtattaaacagaggagaataacaagccacagtgatgacaacctgaaacagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggatgttgtattaaacagaggagaataacaagccacagtgatgacaacctgaaacagct 680

                                                                       
Query: 481 tagcagcacaccttatcttcagctatgtagctaatatgtattcctcattttattatcata 540
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 681 tagcagcacaccttatcttcagctatgtagataatatgtatccctcattttattatcata 740

                                                                       
Query: 541 tctactttatagctgagaaatttgagacatggggagactaaatgtcttgcctaaagtaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctactttatagctgagaaatttgagacatggggagactaaatgtcttgcctaaagtaat 800

                                               
Query: 601 cctgtccacaaatggcagagtcagggttttgctccc 636
           ||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctgtccacaaatggcagagtcagggttttgctccc 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)