AXXXXXXXXXXXXXXXXXXXXXXXXCTATTTTCAGAGATCCGCGGAATTC
ACTAAGCTATTCCTTCCACACATCTTATAAATGATACAGGAAAATCTTAG
ATGAGAGGAGAAAATATATTAAGGAGCTACTTGAAAAAAAAGAGAAGAAC
TGGGCTATTTGAGAGCACTCTTGGGAAAAGACAGGTTGTTTACCCTTTTC
ACTTTTCACAAAGTATTGGTTGAAATAGGAACCCTTTACAGAAGTTTATC
ATTTTCAACCAAGAGCAGCCATGGCTCCAGTGGGTTGGAAAGACAACAAA
TTGTGCAGAATTGTCTGTACCTTGCATTCCAGTATGAATCTCAGTAGGTA
TTCTTTTCAGCACAGCTGCATGTGGTGTAGGAGAAGCCAATAAATAATTG
TACCCAGTGCTGCAGTCCTATAAACATGGAGCTTATGGAACAAGAGGACA
CCTAATTTTGGTAAATATAGGGATTGGTCGTCACTTGGAAGTAGAACGTA
AGAGGTGAACAAGTAGCTCATGGTCCTTACATTGCCATGACTTATCTTTA
AGCAGCTTGCCAGTTTTATAGGCACATAAGCTTTGTCCATTTGAAAACCT
GAGCAAAAACAAAAAAATTCAATTGAGCTCTGTCCTCAGCAAAGAATTGA
GGGGCTGTGAGAAGTGAACCATCATCTCCAGAGTCAGACCAAAGAAATTA
CTCCAGTCC

NCTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCCTAGCATTCACCCTCAGCCCCTT
GGGATGCTTTGGCTATTTTTGTTTGTTTGTTTTCTTTTTATATGAATATT
AGTTTTTGTTCTGTGAAAAGTGTATTGTGTCTTGGCTTTCATTGAAACTG
TAGATTGTTTGATAAGATGTCCACTTGCACATTATTAATTTTACTGATCT
ATCAGTTCAGAAGGCTTTTTTGTCTTCTAGTAGCTCTCCTACTCTGTAAA
TTCCTTTCAAGTGGTCATTTCAGAAGTCATCTATTTTTATTAAAATTTAT
TCCAAGGATTTTGTTTGTTTGCCTGCTTCTTTATGTGTTTACTTCCTTGT
TTTGAGACTTTTGTGAATGTCCTTGTTACTCTTTTATTTTATTTATTTAT
TTATTTATTTATTTATTTATTTATTTATTTGTTCATTTATTTATTTATTT
AGTCTGTATGAGTGTCATTGGCATATAGGAAAGCTTCTGATTTTCTGTAT
GTTAATTTTGTATCTGCTCACATGGTTGAAGTTGTTTATTAGTTGTAAGA
ATTTTATGGTTGTCTTTAGGGCCTCTTACCTATAGAATTTTAACATCTGC
AAATAGAGATCCCTTAACTATTACTTTCTTCTTTGTAACA

Query= MSMg01no104_f21.b1 MSMg01no104_f21.b1 CHROMAT_FILE:
MSMg01no104_f21.b1 PHD_FILE: MSMg01no104_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:36 2005
         (636 letters)



>mm_chr4_80156905_80157946
          Length = 1042

 Score = 1139 bits (589), Expect = 0.0
 Identities = 624/639 (97%), Gaps = 6/639 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactaagctattccttccacacatcttataaatgatacaggaaaatcttagatg 63
           |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 842 ggaattcactaagctatttcttccacacatcttataaatgacacaggaaaatcttagatg 783

                                                                       
Query: 64  agaggagaaaatatattaaggagctacttgaaaaaaa------agagaagaactgggcta 117
           |||||||||||||||||||||||||||||||||||||      |||||||||||||||||
Sbjct: 782 agaggagaaaatatattaaggagctacttgaaaaaaaaaaaagagagaagaactgggcta 723

                                                                       
Query: 118 tttgagagcactcttgggaaaagacaggttgtttacccttttcacttttcacaaagtatt 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttgagagcactcttgggaaaagacaggttgtttacccttttcacttttcacaaagtatt 663

                                                                       
Query: 178 ggttgaaataggaaccctttacagaagtttatcattttcaaccaagagcagccatggctc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggttgaaataggaaccctttacagaagtttatcattttcaaccaagagcagccatggctc 603

                                                                       
Query: 238 cagtgggttggaaagacaacaaattgtgcagaattgtctgtaccttgcattccagtatga 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cagtgggttggaaagacaacaaattgtgcagaattgtctgtaccttgcattccagtatga 543

                                                                       
Query: 298 atctcagtaggtattcttttcagcacagctgcatgtggtgtaggagaagccaataaataa 357
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 542 atctcagtaggtattcttttcagcacagctgcatgtggtgtaggagaagacaataaataa 483

                                                                       
Query: 358 ttgtacccagtgctgcagtcctataaacatggagcttatggaacaagaggacacctaatt 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgtacccagtgctgcagtcctataaacatggagcttatggaacaagaggacacctaatt 423

                                                                       
Query: 418 ttggtaaatatagggattggtcgtcacttggaagtagaacgtaagaggtgaacaagtagc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttggtaaatatagggattggtcgtcacttggaagtagaacgtaagaggtgaacaagtagc 363

                                                                       
Query: 478 tcatggtccttacattgccatgacttatctttaagcagcttgccagttttataggcacat 537
           || |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 362 tcctggtccttacattgtcatgacttaactttaagcagcttgccagttttataggcacat 303

                                                                       
Query: 538 aagctttgtccatttgaaaacctgagcaaaaacaaaaaaattcaattgagctctgtcctc 597
           ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 302 aagctttgttcatttgaaaacctgaacaaaaacaaaaaaattcaattgagctctgtcctc 243

                                                  
Query: 598 agcaaagaattgaggggctgtgagaagtgaaccatcatc 636
           |||||||| ||||||||||||||||||||||||||||||
Sbjct: 242 agcaaagagttgaggggctgtgagaagtgaaccatcatc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1042
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1032
Effective search space:   646032
Effective search space used:   646032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)