Query= MSMg01no106_h07.b1 MSMg01no106_h07.b1 CHROMAT_FILE:
MSMg01no106_h07.b1 PHD_FILE: MSMg01no106_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:54 2005
(634 letters)
>mm_chr4_86411916_86412949
Length = 1034
Score = 1170 bits (605), Expect = 0.0
Identities = 627/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Minus
Query: 1 acacaacaaattatcatccccacaattcctccgttatcaaaatttcaaaatttgccgggc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 913 acacaacaaattatcatccccacaattcctctgttatcaaaatttcaaaatttgccgggc 854
Query: 61 gtggtggcgcacgcctttaatcccagcacgtgggaggcagaggcaggcagatttctgagt 120
||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 853 gtgttggtgcacgcctttaatcccagcacttgggaggcagaggcaggcagatttctgagt 794
Query: 121 tcgaggccagcctggtctacagagtgagttccaggacagccagggctacacagagaaacc 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 793 tcgaggccagcctggtctacagagtgagttccaggacagccagggct--acagagaaacc 736
Query: 181 gtgtctcgggaaaaaaaaa-ttttttttcaaaatttatctgcatgttcccacaccatgca 239
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctgtctcgggaaaaaaaaatttttttttcaaaatttatctgcatgttcccacaccatgca 676
Query: 240 aaatgaatggtatttttttaatcaaaaaaatgtaccattttatcagttattggctacatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaatgaatggtatttttttaatcaaaaaaatgtaccattttatcagttattggctacatt 616
Query: 300 taaacaatgcaaaagagaggattgatggtttcctttagacagctctatcaataccactta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 taaacaatgcaaaagagaggattgatggtttcctttagacagctctatcaataccactta 556
Query: 360 agtcaaagaactataagactgaagtcattttgaataaaatcagttgacagaacattgaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agtcaaagaactataagactgaagtcattttgaataaaatcagttgacagaacattgaca 496
Query: 420 ttctccacggttgtgtctgtggctcaaagttttacacaagagagatgtaaaaagaggctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttctccacggttgtgtctgtggctcaaagttttacacaagagagatgtaaaaagaggctg 436
Query: 480 caaacacaaatgcctaaaagtacttaggctagcctacagaaagttaaaacaggaggatta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 caaacacaaatgcctaaaagtacttaggctagcctacagaaagttaaaacaggaggatta 376
Query: 540 aagcaagttccaggcctaggctggacagtgagtttcattcacctcagcaaaggctactga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagcaagttccaggcctaggctggacagtgagtttcattcacctcagcaaaggctactga 316
Query: 600 ctgactgaggtcctgtctcaagacaaccagagcag 634
|||||||||||||||||||||||||||||||||||
Sbjct: 315 ctgactgaggtcctgtctcaagacaaccagagcag 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_h07.g1 MSMg01no106_h07.g1 CHROMAT_FILE:
MSMg01no106_h07.g1 PHD_FILE: MSMg01no106_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:55 2005
(337 letters)
>mm_chr4_86221335_86222072
Length = 738
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%), Gaps = 1/338 (0%)
Strand = Plus / Plus
Query: 1 gggtggcggcaggccctcggagttctcgcgagatgccggcgggaagtgggtggcggccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggtggcggcaggccctcggagttctcgcgagatgccggcgggaagtgggtggcggccgg 260
Query: 61 gccggagctgatcacatcactggtctgctctcgctagctcggagcgg-tgtggccattgc 119
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gccgaagctgatcacatcactggtctgctctcgctagctcggagcggctgtggccattgc 320
Query: 120 ctcgggcgctgttttctgagacctcgcctcgccgcggtctttcctgcccccagctcgcgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcgggcgctgttttctgagacctcgcctcgccgcggtctttcctgcccccagctcgcgt 380
Query: 180 gcacggcctccgctgccggtcggtgctcggtgtcccgccgtccccatccttggtcggtcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacggcctccgctgccggtcggtgctcggtgtcccgccgtccccatccttggtcggtcc 440
Query: 240 gccgttaggccgtgcctcaggcccagtccgtggcgacgccggtttgtgatgcccaataca 299
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gccgttaggccgtgcctcaggcccagtccgtggcgacgccggcaggtgatgcccaataca 500
Query: 300 gccatgaagaaaaaggtgctgttgatgggaaagagcgg 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccatgaagaaaaaggtgctgttgatgggaaagagcgg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
