AATCCCAACAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTT
CAGAGAATCCGTCGGAATTCAAAATGGATTTTTCCCTAGAAGATCAGAGC
CTACGATACCTAGGCATTATCGCATAAATAGAAACAGAAGTCCTCTGGAA
GATTTATCAGAACAGTCAGAAAACTCAGTTCTCAGAACTAAAATATATTC
TTCCTAATACATGGTCCTAATACTATAGCAAGTGTCCCACGACAACTGTA
TCGATGATAGTTTCTCACTTCAACTGTTCCTCATACTGGCTAACGATCTA
AAATGTGCACACCACATTTTTGCCCGCTACATTCTATCCAACCCTTAACA
CGATAAGCAGATAAGCACGCCTATTGTACTCACACAGCGTTACACTCCTC
TCTCTTTGCGTGAAGCACGAATTCTATATTACGCCTGCTGTGATTCTATG
GTATTGCTTCGCCCCCCACCGCCCTACGCTAGCCACAATCTTACACTCGC
CACATACGATCCTCTCGACCTCATTTATGTTAGCAAATCACCCACCACTA
TAGTTCCTTCCTACGCTGTACGATGTGTTCCCGCGTTTTTTCCGCCTTCC
TTAGTCTCACATGTTCACTCATCCTACTCCCCATATCTGCTCTTTGTTTT
ATAACAAACCCATCCGGCCCCTCGTTAGCTCATACATTTGCCGTTTACCT
CCGTTCCCCTCCTGTTTTTCCCCATTTCCTCCCCCCACCCCCTCACATTT
CCCCGTTTTACTTCCCTCTTTTATTCCCCACTTTCCGTTTTACCCCTTAC
CACCGACCCGCCCTCTTTTCTCCTTTTTCCCCTCATTTTCTTCTTCATTT
TCCTCTTCTCCCCATATCCCCAATATAACCCCTACACCCCTCCCTCTTTC
CTCTCTAAATCCTCCCTCCCCCTCTTATCGCTATATCGCC

TCTGATTTTNNNCCGATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTTGTCCATGCT
TTTACTCTAAGGTGTTCTCTGTCATTACTGGTGAAGTGTGGTTTTGGAGG
AAGCAAAAGTATGGATGTTGTTATCTAATTCAGTCTGGTAGTCAGTGTGG
TTTTGTTGAAGAATTGAAATAGTATTTAGTTATTATTGAAAGGAGTGTCT
GCTCCTGTCATTTTTGTTGGTGTTGTGTTTTCTTGGACCTCTTTATTCTG
TGTCCTGCTATTCATTTTTTTCCTATGACTTCTTGTGTGTCTTTGCCCTT
TTCAGTTGAAGGATTCCTTTTAGTATCTTTTGTAGAGCTTGTTTAGTAGT
CAAAACTTACTTTAATCTCTTTTTAACACAAAAAGTTTTCTTTTTCCTTC
AGTTTCCAACTAGAACAATTGAACATCTGTGCCTTTCATACTTAGTTCTC
ACCTGGCAATAAAATGACCACTTCTTTTTAGGGCAGAACTTTATTAATAG
AAAGAAATATCTGACATGTCCCTAATTGTAAACAACCAAATATGTCCTGT
GTTTCTTTCATTTAAACATAATCTTTTCAGGCAGCATTTATAGCTTCATT
TGCCAAATATGTATTTCTTTCAGTCAGATTAATAACCTCTCTGAGCATAT
TTTATTATTTGACACATATATA

Query= MSMg01no109_b10.g1 MSMg01no109_b10.g1 CHROMAT_FILE:
MSMg01no109_b10.g1 PHD_FILE: MSMg01no109_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:10 2005
         (567 letters)



>mm_chr4_74034932_74035898
          Length = 967

 Score = 1031 bits (533), Expect = 0.0
 Identities = 557/565 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctttgtccatgcttttactctaaggtgttctctgtcattactggtgaagtgtggttttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgtccatgcttttactctaaggtgttctctgtcattactggtgaagtgtggttttgg 260

                                                                       
Query: 61  aggaagcaaaagtatggatgttgttatctaattcagtctggtagtcagtgtggttttgtt 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aggaagcaaaagtatggatgttgttatctaattcagtctgatagtcagtgtggttttgtt 320

                                                                       
Query: 121 gaagaattgaaatagtatttagttattattgaaaggagtgtctgctcctgtcatttttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagaattgaaatagtatttagttattattgaaaggagtgtctgctcctgtcatttttgt 380

                                                                       
Query: 181 tggtgttgtgttttcttggacctctttattctgtgtcctgctattcatttttttcctatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtgttgtgttttcttggacctctttattctgtgtcctgctattcatttttttcctatg 440

                                                                       
Query: 241 acttcttgtgtgtctttgcccttttcagttgaaggattccttttagtatcttttgtagag 300
           ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 acttcttgtgtgtctttacccttttcagttgaaggattccttttaggatcttttgtagag 500

                                                                       
Query: 301 cttgtttagtagtcaaaacttactttaatctctttttaacacaaaaagttttctttttcc 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 cttgtttagtagtcaaaacttactttaatctctttttaacataaaaagttttctttttcc 560

                                                                       
Query: 361 ttcagtttccaactagaacaattgaacatctgtgcctttcatacttagttctcacctggc 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 561 ttcagtttccaactagaacaattaaacatctgtgcctttcatacttagtcctcacctggc 620

                                                                       
Query: 421 aataaaatgaccacttctttttagggcagaactttattaatagaaagaaatatctgacat 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 aataaaatgaccacttctttttagggcagaaatttattaatagaaagaaatatctgacat 680

                                                                       
Query: 481 gtccctaattgtaaacaaccaaatatgtcctgtgtttctttcatttaaacataatctttt 540
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtccctagttgtaaacaaccaaatatgtcctgtgtttctttcatttaaacataatctttt 740

                                    
Query: 541 caggcagcatttatagcttcatttg 565
           |||||||||||||||||||||||||
Sbjct: 741 caggcagcatttatagcttcatttg 765


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)