Query= MSMg01no110_h07.b1 MSMg01no110_h07.b1 CHROMAT_FILE:
MSMg01no110_h07.b1 PHD_FILE: MSMg01no110_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:03 2005
(294 letters)
>mm_chr4_71961692_71962385
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1 atctgccaattttcaagtatctttagactctaattcagaaaatatgaatgaagagaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atctgccaattttcaagtatctttagactctaattcagaaaatatgaatgaagagaaaac 259
Query: 61 cggttgctgatttaaagcagaaaaagaagaaaagccaagtaaactccaagcccttaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cggttgctgatttaaagcagaaaaagaagaaaagccaagtaaactccaagcccttaaagt 199
Query: 121 ggggcaggtgtgtaaatccagcattcagaagggagacatgaggatccgaagttcaaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ggggcaggtgtgtaaatccagcattcagaagggagacatgaggatccgaagttcaaagtc 139
Query: 181 atcctgagtttcgtgggaagctggagaacagcctgggatgtatgtgatcctgtctcaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atcctgagtttcgtgggaagctggagaacagcctgggatgtatgtgatcctgtctcaaag 79
Query: 241 agagaaagaaaagaggcagggggtgaagaggggacagagaggagggagggagag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 agagaaagaaaagaggcagggggtgaagaggggacagagaggagggagggagag 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no110_h07.g1 MSMg01no110_h07.g1 CHROMAT_FILE:
MSMg01no110_h07.g1 PHD_FILE: MSMg01no110_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:03 2005
(401 letters)
>mm_chr4_71829141_71829944
Length = 804
Score = 766 bits (396), Expect = 0.0
Identities = 401/404 (99%), Gaps = 3/404 (0%)
Strand = Plus / Plus
Query: 1 attcgaggaacttgcctatgaataaaataaaggaccccacctccatttcagctccttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcgaggaacttgcctatgaataaaataaaggaccccacctccatttcagctccttctt 260
Query: 61 tcctttaat---ctaaaggagcagagcatgtgagaaccaccttaggtcctacagtgggtg 117
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctttaataatctaaaggagcagagcatgtgagaaccaccttaggtcctacagtgggtg 320
Query: 118 gagctaaactccagcaaaggaagagacagaatgcccagctcactagatcccttaatgcag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagctaaactccagcaaaggaagagacagaatgcccagctcactagatcccttaatgcag 380
Query: 178 aacaaataacttgtgattgacaagagaaaccaacttcaccagcaagaagagatagctgaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaaataacttgtgattgacaagagaaaccaacttcaccagcaagaagagatagctgaa 440
Query: 238 ctcaagagacatgaaccctgaaaggccacaaagcactagggcagacaattaacactcctt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaagagacatgaaccctgaaaggccacaaagcactagggcagacaattaacactcctt 500
Query: 298 ccctggtgagggagtttttcattggcatgccactttaaaattcatgaaaggggaacaaga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctggtgagggagtttttcattggcatgccactttaaaattcatgaaaggggaacaaga 560
Query: 358 aagaaaggaatcaaacaaccacacaggtttcagtgcctagaaag 401
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaaaggaatcaaacaaccacacaggtttcagtgcctagaaag 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 804
Length adjustment: 9
Effective length of query: 392
Effective length of database: 795
Effective search space: 311640
Effective search space used: 311640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
