Query= MSMg01no111_p21.b1 MSMg01no111_p21.b1 CHROMAT_FILE:
MSMg01no111_p21.b1 PHD_FILE: MSMg01no111_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:00 2005
(546 letters)
>mm_chr4_138684110_138685055
Length = 946
Score = 795 bits (411), Expect = 0.0
Identities = 426/431 (98%)
Strand = Plus / Minus
Query: 116 gccaaagatattgctatacttaatgtgtatgggtgacttggctgcatgtatgtctgtaca 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 gccaaagatattgctatacttaatgtgtatgggtgacttggctgcatgtatgtctgtaca 887
Query: 176 tcatgtacatgtctgctgctggaagagatcagaagagggtgttggattggctagagctga 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tcatgtacatgtctgctgctggaagagatcagaagagggtgttggattggctagagctga 827
Query: 236 acttaggatagttgtggacttgaacctgggtcctctgcattagcaactagtgcccttaag 295
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 826 acttaggatagttgtggacttgaacctgggtcctctgcaagagcaactagtgcccttaag 767
Query: 296 cacttagctctctctagtcctagtccaaattgtttttaatgccttgcaatttgaaaaagg 355
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 766 cacttagctctctctagtcctagtccaaattgtttttaatggtttgcaatttgaaaaagg 707
Query: 356 atttaacatttatatgccaacatagtccctaaacagtgtggagttcagagcgctcttcag 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atttaacatttatatgccaacatagtccctaaacagtgtggagttcagagcgctcttcag 647
Query: 416 agtctgcagaggtgtgacttagtccccgcttccccctaccccccactagttcttctgctt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 agtctgcagaggtgtgacttagtccccgcttccccctaccccccactagttcttctgctt 587
Query: 476 tgattatggtctcctcctcaacctgaaatagacattaacctaaaaagataagaaaagtag 535
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 586 tgattatggtctcctcctcaacctgaaatagagattaacctaaaaagataagaaaagtag 527
Query: 536 aggagccaggc 546
|||||||||||
Sbjct: 526 aggagccaggc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 946
Length adjustment: 10
Effective length of query: 536
Effective length of database: 936
Effective search space: 501696
Effective search space used: 501696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_p21.g1 MSMg01no111_p21.g1 CHROMAT_FILE:
MSMg01no111_p21.g1 PHD_FILE: MSMg01no111_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:00 2005
(409 letters)
>mm_chr4_138515223_138516031
Length = 809
Score = 781 bits (404), Expect = 0.0
Identities = 407/408 (99%), Gaps = 1/408 (0%)
Strand = Plus / Plus
Query: 1 cacagcttgggttgaaatttctcaactcttagaaccagaaaggatttggaacaaaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagcttgggttgaaatttctcaactcttagaaccagaaaggatttggaacaaaaacca 260
Query: 61 ccattttcatctccattaagaagacgaaagtttcaggtactgctggtgcacacctttaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattttcatctccattaagaagacgaaagtttcaggtactgctggtgcacacctttaac 320
Query: 121 gccagtgctcgggaggcacaggcaggcagatctctgtgagttcaaggacagccaaagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccagtgctcgggaggcacaggcaggcagatctctgtgagttcaaggacagccaaagctg 380
Query: 181 ttacacagaaagaccctgtctcaaacaaacaaaggaaagaagacagacagacagacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacacagaaagaccctgtctcaaacaaacaaaggaaagaagacagacagacagacagag 440
Query: 241 gagtaagctaaaactcagagaggttaaactgcttatccgaggatgcaaagcttgagttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtaagctaaaactcagagaggttaaactgcttatccgaggatgcaaagcttgagttgg 500
Query: 301 aacagaaggtctatttgacctactccgaaaagctgttacaccttccactcaaagcccagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagaaggtctatttgacctactccgaaaagctgttacaccttccactcaaagcccagg 560
Query: 361 tactcccaacccaaatgtctttcttttggggagtggggggggg-tgtt 407
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 561 tactcccaacccaaatgtctttcttttggggagtggggggggggtgtt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
