CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTCATTTT
CCGGAGTCTACCTTCTTTAGTTCTTTATATATATTAGATGTAAGTCCCCT
ATGTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTT
GTGTCTTTCTCTACACAAAGGATAAAAGAGAAAAGAGGCCTCGAAAGAAA
TTAGGGAAACAATACCCTTATCAATAGTCACAAATAATATAAAATATCTT
GGCATGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAA
GTCTCTAAAGAAAGAAATTAAAGAAGATCTCAGAAGTTGGAAAAATCTCC
CATGCTCATGGATTGGCAGGATCAATATAGTAAAAATGTCTATCTTGCCA
AAAGCAATCTATAGATTCAATGCAATCCCCATCAAAATTCCAACCCAATT
CTTCAATGAATTAGAAAGGGCAATCTGCAAACTCATCTGGAATAACCAAA
AACCTAGGATAGCAAAGACTCTCCTCAAGGATAAAAGCACCTCTGGTGGA
ATCACCATGCCTGACCTAAAGCTGTACTGCAGAGCAATAGTGATAAAAAC
TGCATTGTACTGGTATAGAGACAGATCAATAGACCAATGCAATAGAATTG
AAGACCCAGG

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATATCTGGGTCATAATAATGAGC
AGGTAGATCCTTCAGATATATCTGTGCCCTCCTCACCTTGTGGAGTCCTA
GACTTAAATGGACATTTGTGATCTGGACTCAGGTTCTTGGGCTTATACTG
TCCCCTTTCTGGGTTGTTACATGTGATGTTCCCACTGTTTTTGAAATTAA
TTTATTTTACTACCCATTCACATTGCCCATGTGTTCAAATCATTTAGGTA
TCTGAGCAAATACCTCATTCCCTGGAAGAATTTTCTATTTAAAATGTGAG
TCTCCCAGCACGTATCTCTGGAATCCTTGCAATACCTTCCCATTAAATTT
TCCCACATGTATTAATCTATAATGCAACTCCAATATACTTTATGTTTTCC
ATTTCATGACCACATGTTAAAATGTTAGCTCTATGGAGATGTAGATTTTT
ATTGCTTTGCTTCCATAGAGTCACATTAATATGGATTTTATTTTGTAAAT
GGATAAATGCATACTTCCCCTTATTTTTGATAGACATTCAGACTTCCCCA
TGCATATGGAGAAGGGAGAAAGTGGTCACATGAAAATTGTCCTCCAGCCT
CTTTCTCAGCAATATATTCTATGTAAACTTCATGACTAGCAGGTACTTTC
AAATCA

Query= MSMg01no112_f03.g1 MSMg01no112_f03.g1 CHROMAT_FILE:
MSMg01no112_f03.g1 PHD_FILE: MSMg01no112_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:27 2005
         (617 letters)



>mm_chr4_51110096_51111112
          Length = 1017

 Score = 1170 bits (605), Expect = 0.0
 Identities = 614/617 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatatctgggtcataataatgagcaggtagatccttcagatatatctgtgccctcctcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatctgggtcataataatgagcaggtagatccttcagatatatctgtgccctcctcac 260

                                                                       
Query: 61  cttgtggagtcctagacttaaatggacatttgtgatctggactcaggttcttgggcttat 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtggagtcctagatttaaatggacatttgtgatctggactcaggttcttgggcttat 320

                                                                       
Query: 121 actgtcccctttctgggttgttacatgtgatgttcccactgtttttgaaattaatttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgtcccctttctgggttgttacatgtgatgttcccactgtttttgaaattaatttatt 380

                                                                       
Query: 181 ttactacccattcacattgcccatgtgttcaaatcatttaggtatctgagcaaatacctc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttactacccattcacattgcccatgtgttcaaatcatttaggtatctgagcaaatacctc 440

                                                                       
Query: 241 attccctggaagaattttctatttaaaatgtgagtctcccagcacgtatctctggaatcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attccctggaagaattttctatttaaaatgtgagtctcccagcacgtatctctggaatcc 500

                                                                       
Query: 301 ttgcaataccttcccattaaattttcccacatgtattaatctataatgcaactccaatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcaataccttcccattaaattttcccacatgtattaatctataatgcaactccaatat 560

                                                                       
Query: 361 actttatgttttccatttcatgaccacatgttaaaatgttagctctatggagatgtagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttatgttttccatttcatgaccacatgttaaaatgttagctctatggagatgtagat 620

                                                                       
Query: 421 ttttattgctttgcttccatagagtcacattaatatggattttattttgtaaatggataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ttttattgctttgcttccatagagtcacattaatatggattttattttgtaaatggacaa 680

                                                                       
Query: 481 atgcatacttccccttatttttgatagacattcagacttccccatgcatatggagaaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgcatacttccccttatttttgatagacattcagacttccccatgcatatggagaaggg 740

                                                                       
Query: 541 agaaagtggtcacatgaaaattgtcctccagcctctttctcagcaatatattctatgtaa 600
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 741 agaaagtggtcacatgaaaattgtcctccagcctctttcccagcaatatattctatgtaa 800

                            
Query: 601 acttcatgactagcagg 617
           |||||||||||||||||
Sbjct: 801 acttcatgactagcagg 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)