NNNNNNCCCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCAAATCTTACGACTGGTCCAAAACCACCACCACCACC
ACCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCAT
CACCACCATCACCACCATCACCACAAATCACTTTCAAATAGAGCTTTGTG
ATTTTCCTCATGAGAGAAAAGTATTTTGATCTGGGAGGTTAGTAACATGT
TGTCACCACTGGTCTTTACTGTACACAGATGCAGGTGCTATGGAGGCTGG
AGGTGATCCAGGTGCCCTGGAGCTGGAGCAGCTATGAGCCACCTGATATG
GATGGCAGTCCTCTTAAAGAGTACTGCGTTCAGATCTGCTGAGCTACCTC
GACAACCCTTTGACTGGACTTGTGCCCTTCTCAGCTGGCCTTTTCCTCCT
CTTCCTCCTCTTCCTCTTCTCTTTCTTCCTTCTCCTCTTTTTTTATTTTT
GCCACATTTGATTCACCTACTAAGCCATTAACCAATCAGGTGCAGTGCAT
GTCTCCTCAAACACACTCCAGCACTTAGTTCTCAAACCTAGGACAAAGCT
CGTGAGGCAACAGTGACTTAAAGTGAATTGAAAATTATAAATAAATATTT
ATTTCGTATAGTTCCAAGCTATCTTCTGTCTTTATCGGGAATATTTTCCC
TGGTCTTTT

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTCGGACAACCGGATTCTTCTACAGC
AAAGCTTTTATTGCTTCAACATAAGGAAGACCCTGAACCCGGAAAATGGT
GCTGCTTATATAGCCTGCAGCGTGACGTTTCAGCACCTGATGTGGCGTGA
CAGCACCTGATTAGTTGCTTGCCCATCACCCCATTACTACGCCCTGAGAT
GGGCAGAGACTGGGCATGAATTTATTCTTGCACTTGCACATAAGGCTTGT
TTACTAGTTAGGCACAGTGGAAGCCAGTGCCATCTTATAATGACGATTGC
TCACGGCACGGCTCTCCACATTACACTGCCCTGAGCCAGCTGAGCCAGGG
CAGTAGGGGTGGGTGGGGGGTGCGTGCACAGGTGTGTGCGTGCATGTATG
TGCATATGTCCCTGTCTCTGCGTTGTTAGCACTTGGTAAACAGTGAAGAA
ACTCTTCAATTTCCGACAACAGCTTTTATATGCTTACCGGACGAAAGGAT
ATAACAGTTCCTGCCTCCCACTCTACAATTCCCAGCCCCCCTCCTCTGTG
CTGGGCTCTGTCCACCACCTTATAGGACATGCTGAACCCTCTTTGCACAG
GGAGTTTGGCCCTCAAAATTTTACATATTTTATTTGTGTAAAGCAACATC
TTAGCCCCTACCG

Query= MSMg01no116_g20.g1 MSMg01no116_g20.g1 CHROMAT_FILE:
MSMg01no116_g20.g1 PHD_FILE: MSMg01no116_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:22:41 2005
         (397 letters)



>mm_chr4_3265467_3266263
          Length = 797

 Score =  752 bits (389), Expect = 0.0
 Identities = 395/397 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actcggacaaccggattcttctacagcaaagcttttattgcttcaacataaggaagaccc 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcggacaactggattcttctacagcaaagcttttattgcttcaacataaggaagaccc 260

                                                                       
Query: 61  tgaacccggaaaatggtgctgcttatatagcctgcagcgtgacgtttcagcacctgatgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacccggaaaatggtgctgcttatatagcctgcagcgtgacgtttcagcacctgatgt 320

                                                                       
Query: 121 ggcgtgacagcacctgattagttgcttgcccatcaccccattactacgccctgagatggg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcgtgacagcacctgattagttgcttgcccatcaccccattactacgccctgagatggg 380

                                                                       
Query: 181 cagagactgggcatgaatttattcttgcacttgcacataaggcttgtttactagttaggc 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagagactgggcatgaatttactcttgcacttgcacataaggcttgtttactagttaggc 440

                                                                       
Query: 241 acagtggaagccagtgccatcttataatgacgattgctcacggcacggctctccacatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagtggaagccagtgccatcttataatgacgattgctcacggcacggctctccacatta 500

                                                                       
Query: 301 cactgccctgagccagctgagccagggcagtaggggtgggtggggggtgcgtgcacaggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactgccctgagccagctgagccagggcagtaggggtgggtggggggtgcgtgcacaggt 560

                                                
Query: 361 gtgtgcgtgcatgtatgtgcatatgtccctgtctctg 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgtgcgtgcatgtatgtgcatatgtccctgtctctg 597


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space:   305744
Effective search space used:   305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)